Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0886 ATGGCAGGCCCACCAGTTCATGATTCTTCCCTCTCCTCCATGTCTCCTCCCTCAACCTCTCCCTTCCCCATCATCGTCCTCTTCTTCTTTATTTCGCAGCTTGCTTCTGCTCACACTTGCTCTTCACGTCCACAAACGTCGTCGTCTTCATCTTCATCTTCTTCTTCTCTTTGCCCACCATTCCCTTCAAATCCTCCTTTTCCATTCTCTTTCTCGCCAGGCTGTGGCCACCCTTCCTTCCAAATTCAATGCTCCACTCTTAATTCTACCATCACCATTAACCACATAACTTTTTCTGTTCTTAGTTATAACCCCAATTCCTCTTCTCTCACCCTCTTTCCTTATATTGATAATGCATCTGAAGCAGCAAGCTCAGCCGCCCACAGAAATTGCTCCACCCCTCACTTGCTTTCCTTTCTCAATTCTTCTATTGATCTCTCTGGCTCTCCCTTCAGAATCTCCGATGCACTCTGTTCCCGCCTCTTTGATATCCCACCTTGCTCGCCGCCCACTCTGCCAGATTGTAGCCATTGTCCATGGGAATGTAGCCTCATCAAGAACCCAGCTTACCTCCTCCGTGACTGCAGATCTGCCCACCGTCACTCCGTTTCAGACGTAGAGGGCCGCTGCGAAAGTGACGTTTTGGGTTATCTCGACGAGATACTTGCTCGAGGGATCGAAGTCGAGTGGGATGAAGCTCAAGATCCCTACTTTTCGAGCTGCAGAAACTGCAGCGCAAACAAGGGAGTTTGTGGATTCAATTCATCGGATCCACATAATCAATTTATGTGCCTTCGCTCCAAATCTGAATCTAGTTTCTCACCTGGTTGGATTGGAAGGGTGAATCCGAAGCGTAATACGGTTTTGTCCCTTGTCATCCCTTCAATGTTGTTGATTCTTTTTGTTTCTGTGGCCACTGCAATTTTCCGCTCGAGGAGATTCAAGTCATCGAAGACAGAGGAGGACCCAACGATCCTTTTTCTTCACACCCAGCGCTGTGCTAGTCTTCTTCCTCCTGTCTTCACCTACGAGGAATTGGAGGCGGCGACAAATCGGTTCGACCCGAAACGCAAAATTGGGGATGGTGGGTTCGGGTCGGTGTACTTGGGTCATCTCCATGATAGCAGAATCGTCGCCGTGAAGTACCTCCATAAGCACCAAGCGGAGGCCGCCGCAGGACGAGCTTTTTCCACCAAGTCCTTCTGCAATGAAATTTTGATTCTTTCTTCGATCGACCACCCAAATCTAGTCAAGCTTCACGGGCGGCACTCCGATCGTCGTCATATTCCCTCGCCGGTGCTGCTGAGGTGGCGAAGAACTATGAAGCGAGGGATTGTGGATCGTGAGATTGGTATGGGCCCAAAATGCACTGTGGGATTTGACTATCTGAGTTCACTTTTGTCGACTAGTCAAATGAACCCCACGAGAACGATAATTCCACGTTGGACTTGCTCGCACGAGGGATTCGTTTCGTAG 1476 0.4932 MAGPPVHDSSLSSMSPPSTSPFPIIVLFFFISQLASAHTCSSRPQTSSSSSSSSSSLCPPFPSNPPFPFSFSPGCGHPSFQIQCSTLNSTITINHITFSVLSYNPNSSSLTLFPYIDNASEAASSAAHRNCSTPHLLSFLNSSIDLSGSPFRISDALCSRLFDIPPCSPPTLPDCSHCPWECSLIKNPAYLLRDCRSAHRHSVSDVEGRCESDVLGYLDEILARGIEVEWDEAQDPYFSSCRNCSANKGVCGFNSSDPHNQFMCLRSKSESSFSPGWIGRVNPKRNTVLSLVIPSMLLILFVSVATAIFRSRRFKSSKTEEDPTILFLHTQRCASLLPPVFTYEELEAATNRFDPKRKIGDGGFGSVYLGHLHDSRIVAVKYLHKHQAEAAAGRAFSTKSFCNEILILSSIDHPNLVKLHGRHSDRRHIPSPVLLRWRRTMKRGIVDREIGMGPKCTVGFDYLSSLLSTSQMNPTRTIIPRWTCSHEGFVS 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0886 491 ProSitePatterns Protein kinases ATP-binding region signature. 359 381 IPR017441 GO:0005524
Lele53g0886 491 Pfam Protein kinase domain 355 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele53g0886 491 FunFam Putative serine/threonine-protein kinase At1g18390 family 329 432 - -
Lele53g0886 491 ProSiteProfiles Protein kinase domain profile. 353 491 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele53g0886 491 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 25 427 IPR044652 GO:0004672
Lele53g0886 491 Pfam Wall-associated receptor kinase C-terminal 192 266 IPR032872 -
Lele53g0886 491 Gene3D Phosphorylase Kinase; domain 1 329 429 - -
Lele53g0886 491 SUPERFAMILY Protein kinase-like (PK-like) 338 428 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0886 Lele-ChrLele53 18573748 18576072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0886 58 457 Receptor kinase-like Gene Family AT1G69910 54.657 1.22e-127 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Lele53g0886 Pkinase 6.2e-10 CL0016