Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0862 ATGTCATTTTCTGCCTTGGAGCATTGTATTCTACTGGTCAGCTTCAAGAGAAGGAGGAGTAGCCCATCACTGAGATTTGCGTCTTTGAGAGGAGAGGGTTCTCGAGAGATGGGGTTGGTTGCTGATAATGGTAAGGTGGAGTCTTGGGATGTCAGCAAATCAAATGGGAAGAAGAAGAAGAAGAAGAAGGATGATGGCGTTGTAGAAAAGGAAGAAACTGGGTGTTGGGTTGGGCTGAGGTTCATTGGCAGTTGCATTTCTTCGAGATCCAAGGTTGATAGCTCAGTTAGCAGCATCAGCACTCATTACGCTGAAAGTAAATCGACTATTGGTACAAGTAGAGATCAACCAACAGCTCCGGTAGTCTCTTCTACGACCACAAGTAACGCAGAAAGTAATTCATCCACCTCCAAACTTGAAGAGGAGCTTAAAGTTGCTTCCAGGCTGCGAAAATTCTCATTTAACGATCTTAAGTTGGCAACAAGAAACTTCCGGCCAGAGAGTCTTCTTGGTGAAGGTGGGTTTGGTTGTGTATTCAAGGGATGGATTGAAGAAAATGGAACTGCTCCAGTGAAACCTGGCACAGGGCTTACAGTTGCTGTAAAAACCCTCAATCATGATGGGCTCCAGGGTCATAAAGAATGGCTGGCTGAAGTAAGTTTTCTTGGTGATCTAATTCATCCTAACCTCGTTAAACTTATAGGCTACTGTATTGAAGATGATCAAAGGTTGCTAGTTTATGAATTCATGCCTCGGGGAAGTCTGGAGAACCACCTATTTAGGAGATCCCTGCCGCTTCCATGGTCCATCAGAATGAAAATTGCACTAGGAGCTGCAAAGGGTCTGGCATTTCTTCATGAGGAAGCTGAACGACCAGTAATATATAGGGATTTTAAAACTTCCAATATACTATTGGATGCTGAGTACAATGCCAAACTTTCGGATTTTGGACTTGCCAAAGATGGTCCGGAGGGTGATAAAACCCATGTATCCACCCGTGTGATGGGAACCTATGGTTACGCAGCACCAGAATATGTCATGACAGGTCACCTTACATCAAAAAGTGATGTGTACAGTTTTGGAGTAGTTCTTCTTGAGATGTTGACTGGCAGAAGGTCGATGGACAAAAACCGACCCAATGGTGAACATAATCTTGTTGAATGGGCTCGTCCGCATCTCGGAGAGAGAAGAAGGTTCTATAGGTTGGTAGATCCTCGGTTAGAAGGTCACTTTTCTATAAAAGGAGCTCAAAAAGCTGCCCAACTGGCTGCTCACTGCCTTAGCAGAGATCCAAAAGTCAGACCCCTGATGAGTGAAGTTGTAGAAGCTCTAAAGCCTCTGCCAAGCCTTAAGGACATGGCGAGCTCATCATATTATTTTCAGACAATGCAAGCCGACCGATTTGGTGCGAGCCCTAATACTCGAAATGGGCGAACACTGCTTACCCGGAATGGGCAGCAGCAGAGGAGCCTTTCTATACCTCATGGTACGCATGCTTCTCCTTATCACCACCAGTTTCCCCTACAATCCCCTAAACCTAATGGCAAAGCATAG 1554 0.4517 MSFSALEHCILLVSFKRRRSSPSLRFASLRGEGSREMGLVADNGKVESWDVSKSNGKKKKKKKDDGVVEKEETGCWVGLRFIGSCISSRSKVDSSVSSISTHYAESKSTIGTSRDQPTAPVVSSTTTSNAESNSSTSKLEEELKVASRLRKFSFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVSFLGDLIHPNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLVDPRLEGHFSIKGAQKAAQLAAHCLSRDPKVRPLMSEVVEALKPLPSLKDMASSSYYFQTMQADRFGASPNTRNGRTLLTRNGQQQRSLSIPHGTHASPYHHQFPLQSPKPNGKA 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0862 517 ProSiteProfiles Protein kinase domain profile. 164 450 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele53g0862 517 MobiDBLite consensus disorder prediction 105 136 - -
Lele53g0862 517 Gene3D Transferase(Phosphotransferase) domain 1 250 464 - -
Lele53g0862 517 ProSitePatterns Protein kinases ATP-binding region signature. 170 202 IPR017441 GO:0005524
Lele53g0862 517 ProSitePatterns Serine/Threonine protein kinases active-site signature. 293 305 IPR008271 GO:0004672|GO:0006468
Lele53g0862 517 SUPERFAMILY Protein kinase-like (PK-like) 150 464 IPR011009 -
Lele53g0862 517 CDD STKc_IRAK 170 447 - -
Lele53g0862 517 MobiDBLite consensus disorder prediction 105 139 - -
Lele53g0862 517 Gene3D Phosphorylase Kinase; domain 1 123 249 - -
Lele53g0862 517 MobiDBLite consensus disorder prediction 484 517 - -
Lele53g0862 517 FunFam Probable serine/threonine-protein kinase PBL8 250 465 - -
Lele53g0862 517 Pfam Protein tyrosine and serine/threonine kinase 168 444 IPR001245 GO:0004672|GO:0006468
Lele53g0862 517 FunFam Serine/threonine-protein kinase BIK1 131 249 - -
Lele53g0862 517 PANTHER OS01G0588500 PROTEIN-RELATED 127 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0862 Lele-ChrLele53 18347604 18351811 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0862 133 460 Glycoside Hydrolase AT3G07070 55.255 2.32e-119 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele53g0862 PK_Tyr_Ser-Thr 8.3e-46 CL0016