Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0859 ATGGAGGTAGCCTCTGTGAAATGTGAACTGAGCCCAACAGGCCATAGGTCTTACATGATGGGTGGTGGTGACAGTGATGTTAGTAAGTGTGGCAAAAGGAGGCGAAGAGATTCTTCTTTGGCCATCTTAGAAGCCAATGGACAGCCACAAGAACAGCAGCCACAGGGCAACCGATCAACCACCACCACCGTAAAGAGAAGCTCGAGGTTTCGGGGAGTTAGCAGACATAGGTGGACAGGAAGGTATGAGGCTCATCTATGGGATAAAGGAACATGGAATCCAACTCAGAAGAAGAAAGGGAAGCAAGGGGCTTATACTGATGAAGAAGCGGCTGCTAGAGCTTATGATTTAGCTGCACTAAAGTACTGGGGAACTTCAACTTTCACAAATTTCCCTGTGTCTGAGTATGAGAACGAGATTGGCATCATGAAAACTGTAACTAAAGAAGAATACCTTGCTTCATTAAGAAGGAGAAGCAGTGGTTTTTCTAGAGGTGTATCAAAGTACAGAGGAGTAGCAAGGCACCATCACAATGGCAGATGGGAAGCAAGGATAGGGAGAGTATTTGGCAACAAGTACCTCTACCTTGGGACTTATAGTACACAAGAAGAGGCTGCTCGCGCATACGACATCGCAGCAATTGAGTACAGAGGCATAAATGCAGTGACAAATTTTGACTTGAGCACATACATCGGATGGCTAAGACCTGAAGCACCTTCTTCTTCTTTACTAGTGGGAAATCCAAGCAAAGATCTTCAGAACATGACAACCTCAAACCTTGTTCAAACACAAGGAACCACTGAGGTATCCAACTTCATCCCCAGTCCATTCCCTACTGGTGCTTCTGATAGTGCAAAGAAGCAAGAAAATTCAAAATGCATGAGCTCTCTAAGTGCTTGCATTAATAACAAGTCATCTTCCCCAACAGCACTAGGGATTCTCATGAAATCCTCAGTATTTAGTGAGCTGATGCAGAAGAATCTGAATTCTGCTAATGAAGAATCAGAAGAGAGTGAATTGAAAATCCCACAAGAAGGCAGTGAAGGGTTTGGAGTGGCTTTTGATCATGAAATTTCAAGTAACTCTTTCTTATGCCCTTCCAATAATAATAGCAGATTTTTCGTGGAGTCACCAGAAGAAAGCACGTGGCCATGGTATCATAGAACCGCGCAATCCCCATGGAGTGGTGCTTTAAACTGA 1200 0.4408 MEVASVKCELSPTGHRSYMMGGGDSDVSKCGKRRRRDSSLAILEANGQPQEQQPQGNRSTTTTVKRSSRFRGVSRHRWTGRYEAHLWDKGTWNPTQKKKGKQGAYTDEEAAARAYDLAALKYWGTSTFTNFPVSEYENEIGIMKTVTKEEYLASLRRRSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEYRGINAVTNFDLSTYIGWLRPEAPSSSLLVGNPSKDLQNMTTSNLVQTQGTTEVSNFIPSPFPTGASDSAKKQENSKCMSSLSACINNKSSSPTALGILMKSSVFSELMQKNLNSANEESEESELKIPQEGSEGFGVAFDHEISSNSFLCPSNNNSRFFVESPEESTWPWYHRTAQSPWSGALN 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0859 399 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 48 302 - -
Lele53g0859 399 Gene3D AP2/ERF domain 167 228 IPR036955 GO:0003700|GO:0006355
Lele53g0859 399 Gene3D AP2/ERF domain 68 134 IPR036955 GO:0003700|GO:0006355
Lele53g0859 399 PRINTS Ethylene responsive element binding protein signature 208 228 IPR001471 GO:0003700|GO:0006355
Lele53g0859 399 PRINTS Ethylene responsive element binding protein signature 70 81 IPR001471 GO:0003700|GO:0006355
Lele53g0859 399 Coils Coil 321 341 - -
Lele53g0859 399 MobiDBLite consensus disorder prediction 43 68 - -
Lele53g0859 399 SUPERFAMILY DNA-binding domain 167 228 IPR016177 GO:0003677
Lele53g0859 399 FunFam AP2-like ethylene-responsive transcription factor 167 228 - -
Lele53g0859 399 SMART rav1_2 168 232 IPR001471 GO:0003700|GO:0006355
Lele53g0859 399 SMART rav1_2 69 138 IPR001471 GO:0003700|GO:0006355
Lele53g0859 399 ProSiteProfiles AP2/ERF domain profile. 69 132 IPR001471 GO:0003700|GO:0006355
Lele53g0859 399 Pfam AP2 domain 68 124 IPR001471 GO:0003700|GO:0006355
Lele53g0859 399 Pfam AP2 domain 167 218 IPR001471 GO:0003700|GO:0006355
Lele53g0859 399 SUPERFAMILY DNA-binding domain 68 134 IPR016177 GO:0003677
Lele53g0859 399 CDD AP2 167 228 IPR001471 GO:0003700|GO:0006355
Lele53g0859 399 MobiDBLite consensus disorder prediction 13 70 - -
Lele53g0859 399 ProSiteProfiles AP2/ERF domain profile. 168 226 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0859 Lele-ChrLele53 18315176 18318459 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0859 21 270 AP2-EREBP Transcription Factor Family AT5G57390 51.515 9.04e-81 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Lele53g0859 AP2 1.9e-07 CL0081