Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0853 ATGAAAATTTTCTGGGTTTCTGCAATTTTTCTTGTTCTTCTTCTTGCTCACATTTCAACTGCACAGCTAACACCAAGTGAGAGTAGAATTCTATTCCAAGTTCAGAAAATTCTTGAATATCCTCAGGTTCTTCAAGGATGGAACAACTGGACAAATTTCTGTTATCTTCCTTGTTCACCTTCTCTTCAGATTGTCTGCTCTAACATTCATGTAACAGAGTTAACAATAATTGGAAACAAAAAAACCTCTCTTTCTGAAACATTTTCCATTTATTCTTTCTTCACTGTCTTGACAAAGCTTTCAAATTTGAAGGTACTTTCATTAGTTTCCTTGGGTTTGTGGGGTCCTTTGCCAGGCAAGATCAACAGGTTCAGGTCTCTTCAAGTTCTGAACTTGAGCTCAAATTCCATTCATGGCCAGATCCCACTATCAATCTCTTCCATGAAAAGTCTCAGGAGTCTGGTTTTGTCTGGTAACTTGTTCAATGGCACAGTCCCAGATCTTAAAAGATTAACTTCTCTTGAAGAACTCAATCTGGGAAATAATAAACTAGGTCCTGAATTCCCTTCATTAGGCAATAATCTTGTCTGTTTAGTATTGAGAAACAATTCTCTGAGGTCTAAATTTCCTTCCAAGTTTAATAATCAGTTTATCAGGCTTCAAAAACTTGATCTTTCTTCCAATCAAGTTTCTGGAAACATCCCATCTTCTCTGCTCTCTCTGCCTTCCATTCAGTATTTGAACTTTGCAGACAACAAGCTAAGCGGTTCCCTTTCAATGAACATAAGATGTGGTTCTTCTCTGACATTTGTGGATATCTCAAACAATGTTTTGTTGGGAAAATTGCCGTCCTGTATTGAATCAACCTCAAAGTCCTCAAATCGAACGGTTTTGTATTCTGGGAATTGTTTGTCCATAAGAGGCTCAAAAGATCAACAACCAACTTCATATTGCAAGAAAGAGCAAGCTTTAGCTGCTAAGCCTCTTGAAGGAAGCCAGAAAAAGTCAGATATGAGATTACGGTTGATACTTGGTATAATTGGAGGGTGTGTAGGAATTTCAATGCTTTTCACTCTGATCATTCTTCTCATCTTGAGGAAGACCAAACCAGACAGAGCTGATAATTGCATAGACAGATCTGTTGCAGATAAATCCCCTGTTCATGCATCCCCAAGACCAAATACTGATACAAGACGAGTTCCTCAGACTGCGAGGCTGGAAGCGATTGTACTTCAACCATACAGAATTTTCACATTGGAAGAAATAGAGGAGGCAACAAACAATTTTGACCCATCAAATCTGATAGGAGAAGGAACAGAGGGGCAGCAATATAAAGGTTGGATCAGAGATGGGTCTGCGGTCCTGATTAACTGTGTAAAGCTAATGACCAAGACTGTGACACACAACCAAATTGACGTGTTGTCCAATTTGAGGCATAGGCATTTGGTAAGTGTTATTGGACACTGCATAATTGACTCTCAGGACCATCATCAGAACACAAGCACACTCTTTATTGTTTATGAACAATTCTCAAATGGGTCATTAATGGGTCATTTAACAGATTGGCGAAAGAAGGAAGTTCTGAAATGGCCTCAAAGAATGGCGATCTCCATAGGAATTGCTAGGGGAATCCAGTTCTTACATACAGGGGTTGTTCCGGGTATATTTGGGAATAAGATAAAGATTGAGAAAATCCTTTTGGATGATAGTCTCAATGCAAAAGTCAGTGGATATAACATTCCATTGTTATGCAATCATGTTGACGGCACTGACAACACCGCAGAAAAGGAAGATATATATCATTTTGGTATTATTCTACTTGAAGTTATCACTGGCAAATCAATTTCTTCTGTCAATGAAGTAGAGGAGCTGAAATATGAGCTAGAGAGAAGTTTACCAGAAGCAGCATCAATACTTAGAGGAGTGACTGATCCCTCAATCAGGGGAAGTTATGCGTATGAATCAATGAGAACCACTGTTCAGATTACCATAAGTTGCCTCAGTAAAGTTCCTAATATACGCCCTTCAATGGAAGATGTTCTTTGGAATTTGCAGTACTCAATTCAGGTCCAAGAGAACTGGACCAGCAGTGGAAATCTTGGACTCGGTACTAGATTTTAG 2121 0.389 MKIFWVSAIFLVLLLAHISTAQLTPSESRILFQVQKILEYPQVLQGWNNWTNFCYLPCSPSLQIVCSNIHVTELTIIGNKKTSLSETFSIYSFFTVLTKLSNLKVLSLVSLGLWGPLPGKINRFRSLQVLNLSSNSIHGQIPLSISSMKSLRSLVLSGNLFNGTVPDLKRLTSLEELNLGNNKLGPEFPSLGNNLVCLVLRNNSLRSKFPSKFNNQFIRLQKLDLSSNQVSGNIPSSLLSLPSIQYLNFADNKLSGSLSMNIRCGSSLTFVDISNNVLLGKLPSCIESTSKSSNRTVLYSGNCLSIRGSKDQQPTSYCKKEQALAAKPLEGSQKKSDMRLRLILGIIGGCVGISMLFTLIILLILRKTKPDRADNCIDRSVADKSPVHASPRPNTDTRRVPQTARLEAIVLQPYRIFTLEEIEEATNNFDPSNLIGEGTEGQQYKGWIRDGSAVLINCVKLMTKTVTHNQIDVLSNLRHRHLVSVIGHCIIDSQDHHQNTSTLFIVYEQFSNGSLMGHLTDWRKKEVLKWPQRMAISIGIARGIQFLHTGVVPGIFGNKIKIEKILLDDSLNAKVSGYNIPLLCNHVDGTDNTAEKEDIYHFGIILLEVITGKSISSVNEVEELKYELERSLPEAASILRGVTDPSIRGSYAYESMRTTVQITISCLSKVPNIRPSMEDVLWNLQYSIQVQENWTSSGNLGLGTRF 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0853 706 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g02780 24 193 - -
Lele53g0853 706 Gene3D Phosphorylase Kinase; domain 1 394 508 - -
Lele53g0853 706 SUPERFAMILY Protein kinase-like (PK-like) 409 684 IPR011009 -
Lele53g0853 706 Gene3D Transferase(Phosphotransferase) domain 1 511 588 - -
Lele53g0853 706 Gene3D Transferase(Phosphotransferase) domain 1 589 695 - -
Lele53g0853 706 Gene3D Ribonuclease Inhibitor 24 331 IPR032675 -
Lele53g0853 706 Pfam Protein tyrosine and serine/threonine kinase 434 576 IPR001245 GO:0004672|GO:0006468
Lele53g0853 706 SUPERFAMILY L domain-like 37 302 - -
Lele53g0853 706 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 195 323 - -
Lele53g0853 706 MobiDBLite consensus disorder prediction 377 399 - -
Lele53g0853 706 ProSiteProfiles Protein kinase domain profile. 429 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele53g0853 706 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 194 685 - -
Lele53g0853 706 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 510 699 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0853 Lele-ChrLele53 18275882 18279359 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0853 19 628 Miscellaneous Gene Families AT2G02780 47.604 4.24e-171 504
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Lele53g0853 PK_Tyr_Ser-Thr 1e-08 CL0016