Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0852 ATGGGGAGGGTCAATCCAATTTCTTCAAGGGGCCAACCTCGTGCAAGGTATCTATTTATTGCGCTAATTCAGGTTACTTACTGTTGCCTACCGTCTTCTCCGCCACTGTCACTGCTGCGAGTAAAAAGCACAACTTTCCTCGAAGCTCAAACTCTGCTCGCAGCTGCATCGCCACAAGCGAGTAATGGAAGCTTAGGGTTCCGCTGCTGCAGTTTGAGGCTGTGCTTTGATCTAGGTTCTCCTTTCATGAGTTGTTTTATAACCCAGCTTGCCTTAAGTTCTTTCAGATCTTGGTACCTGATTTCTAAATCAAAGTCTCATTCATCAAAAAAGAAGGATTCCTTTCCTTTAAGTACCAAGGACTTGCTGGCAGTGTCCTCCGAAATGCATGTGTCTGATCCAATTGCGGTTCCTACACTGATATCCCAACCCATTTCTGGAGCTACTGCAACTAAGGAATCAGTTTCTGAAAAGGTCATAGTCAGTGAATTGTCAAACGACAGGGTTGTTATCTCGGCTAGAGATGAAGAGACCAGTGCACAAGCTGTTGCTGGTTTTGGTTCACAGGATGATCCTGAGAAAATCAGGCTTAACGAAGCTGCTATAAAAGCTCAAGCTGCTTTTAGGGGCTATCAGGCTCGGCAGGAATTTCAAACCCTCAAAGGTATCATACACCTGCAAGCCCTTATTCGAGGCAACTTGGTCAGGAAAGAAGCAGTTGCTACTTTATACTGTGTGAATGGAATAATTAAGTTTCAAGCATTGGTTCGTGGTTACAAGGTTAGGCGTTCTGAAATTGGTCTTGCAGTGCATAAAATTTGCAAGGGTACTAAGTCTTTAATTGCTGTTGGAGAATCAACATCGACACAGACAGAAAATCGGTCCAAAAGTGTCTTTGTTAACAAGCTTCTGGCTTCATCATCCTTTGTCTCTCCTCGATGTATCAACTATGATCCTGAACAACGTAATTTGGCTTCAGACTGGCTTGATCGTTGGACAAGTTCTCTCTTCTGGGCACCTATTCTGGGCCTGGAATCAAAAACAACACATGACTCAGTGTCTAACGAGAAAAATTGCAACAGTCAAACAGTTGAAAAGAATGGCGGCCAAGTTAAAAGAAATGCCCGGAAAAGTTCTGGCATAAAAGTTAATGATGGTTCAGCCTCAGATTCAAACAAAAATAAGCGCCGTCCAAAAAGGGTTTCAGCTCACCCATGGCATTCAGGCCAAGAAAATACACAGAAGGAAGTTGAGAAAAGTAGTTTAGGAAAACCACTCAAGCAGAATGTTTCTGATAGATCTGAGATTGTTAATGGGAAAGGAAAAGGCATACCAAGAAAAGTATCTGGTCATAGTGCCACTGATGTTTCAGAGAATGAACCAAATGTTTCTGCAGAAAAAATGAAAGATTCAGCCATGGTAAAATCCAAACATTCTGATCATGAGCGAAGCCCCATACAACAAGCAGAAGATGAACATAATTGTCCCATAGCTAACTTGCCGTCTGGATTGAAGAACAGTAAAGACAATGGTATTCAAGGAGTCAATGAGGACTTGAACTGCATTGACAGTGTGAGCCCTAAGAATTGCCCGAGAAGAGCTTCACTGCCTGCAAAGTTTGACAGTCAAGACGATGGTGTGCAAAAAACTCCGAGACTGCCCAGCTACATGGCCCCTACTGAATCTGCAAAAGCTAGGGTAAGAGGACAAGGCTCCCCTAGGCTTGTTAGTGACTTGATAGAAAACAATGGTCCAACCCGGCGGCATTCACTTTCATCTTCAGTCAATGGCAAGTTAGGTTCATTTTCTCCACGAGCAGAAAGACTGGGAGCTTTGAGCAGCAAGGGAGTAATAAGAACTGATAAATCTCTGTCATCTTCAAGGGATGGGAGTGAGAAGTTGATCCAACCTCAGTGGAGAAGGTGA 1926 0.4346 MGRVNPISSRGQPRARYLFIALIQVTYCCLPSSPPLSLLRVKSTTFLEAQTLLAAASPQASNGSLGFRCCSLRLCFDLGSPFMSCFITQLALSSFRSWYLISKSKSHSSKKKDSFPLSTKDLLAVSSEMHVSDPIAVPTLISQPISGATATKESVSEKVIVSELSNDRVVISARDEETSAQAVAGFGSQDDPEKIRLNEAAIKAQAAFRGYQARQEFQTLKGIIHLQALIRGNLVRKEAVATLYCVNGIIKFQALVRGYKVRRSEIGLAVHKICKGTKSLIAVGESTSTQTENRSKSVFVNKLLASSSFVSPRCINYDPEQRNLASDWLDRWTSSLFWAPILGLESKTTHDSVSNEKNCNSQTVEKNGGQVKRNARKSSGIKVNDGSASDSNKNKRRPKRVSAHPWHSGQENTQKEVEKSSLGKPLKQNVSDRSEIVNGKGKGIPRKVSGHSATDVSENEPNVSAEKMKDSAMVKSKHSDHERSPIQQAEDEHNCPIANLPSGLKNSKDNGIQGVNEDLNCIDSVSPKNCPRRASLPAKFDSQDDGVQKTPRLPSYMAPTESAKARVRGQGSPRLVSDLIENNGPTRRHSLSSSVNGKLGSFSPRAERLGALSSKGVIRTDKSLSSSRDGSEKLIQPQWRR 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0852 641 MobiDBLite consensus disorder prediction 349 493 - -
Lele53g0852 641 PANTHER IQ-DOMAIN 5-RELATED 111 596 - -
Lele53g0852 641 Pfam IQ calmodulin-binding motif 199 218 IPR000048 GO:0005515
Lele53g0852 641 Pfam IQ calmodulin-binding motif 221 238 IPR000048 GO:0005515
Lele53g0852 641 Pfam IQ calmodulin-binding motif 249 263 IPR000048 GO:0005515
Lele53g0852 641 ProSiteProfiles IQ motif profile. 197 225 IPR000048 GO:0005515
Lele53g0852 641 Gene3D - 195 266 - -
Lele53g0852 641 MobiDBLite consensus disorder prediction 349 369 - -
Lele53g0852 641 Pfam Protein of unknown function (DUF4005) 542 617 IPR025064 -
Lele53g0852 641 SMART iq_5 196 218 IPR000048 GO:0005515
Lele53g0852 641 SMART iq_5 244 266 IPR000048 GO:0005515
Lele53g0852 641 SMART iq_5 219 240 IPR000048 GO:0005515
Lele53g0852 641 MobiDBLite consensus disorder prediction 462 489 - -
Lele53g0852 641 ProSiteProfiles IQ motif profile. 221 248 IPR000048 GO:0005515
Lele53g0852 641 MobiDBLite consensus disorder prediction 535 641 - -
Lele53g0852 641 MobiDBLite consensus disorder prediction 618 633 - -
Lele53g0852 641 MobiDBLite consensus disorder prediction 576 600 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0852 Lele-ChrLele53 18263345 18269293 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0852 134 641 IQD Protein Family AT2G02790 35.149 1.07e-76 254