Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0849 ATGGGTAACTGCCTAGATTCTTCTGCCAAAGTAGATACAGCTCAAAGTTCCCGAACTTCTGGATCTGGAATTTCAAAAACTAGCCCTTCATCTGCACCTTCCACATTATCAATTCCTTCATACAGTGAAAAAAGCAATGCTTCAAGTCTTCCCACACCAAGGTCTGAGGGTGAAATCTTGTCTTCTCCGAATCTAAAGGCCTTTACATTCAATGACCTAAAGAATGCCACCAGAAATTTTCGTCCCGACAGTCTTCTTGGAGAAGGGGGATTTGGCTATGTTTACAAGGGATGGATTGATGAAAACACTTTCCAGGCTGCAAGACCTGGATCAGGGATGGTTGTTGCTGTGAAAAGGCTAAAACCTGAGGGTAGCTTTCAAGGTCACAAGGAGTGGTTGACTGAAGTTAACTACCTTGGGCAACTCCATCATGTAAATCTGGTTAAATTAATTGGGTACTGCTTGGAGGGAGAGAACCGGTTATTGGTCTATGAGTTTATGCCCAAAGGGAGCTTAGAAAATCATCTCTTTAGAAGAGGGCCTCAACCACTCTCTTGGTCAGTGAGGATGAAAGTGGCCATTGGGGCTGCTAGAGGGCTCTCTTTTCTCCATAATGCCAAATCACAAGTCATATACCGTGATTTCAAAGCTTCCAACATCCTACTAGATGCTGACTTCAATGCTAAACTCTCTGATTTTGGCCTAGCTAAGGCGGGTCCTACGGGCGATAAAACTCATGTGTCTACTCAAGTTATGGGTACTCATGGATATGCAGCTCCTGAATATGTTGCTACAGGTCGGCTGACAGCCAAGAGCGATGTCTATAGTTTTGGAGTTGTGTTGCTTGAACTTCTATCTGGACGGCGTGCGGTTGATAGATCGAAAGCTGGAGTGGAGTTAAATCTGGTAGATTGGGCGAAACCATATTTGGGTGACAAAAGAAGACTTTTTCGGATTATGGACACCAAGTTGGAGGGCCAATACCCTCAAAAAGGAGCCTACATGGCTGCAACTCTTGCTCTACAATGCCTGAATAGTGAAGCCAAGGCAAGGCCTCCGATGACTGAGGTCTTAGCAACACTTGAACAGATCGAAGCCCCCAAGAACACAGGCCGACACTCCCACTCAGAGCCACAGAGATCCCATGTTCCTCCAATAAGAGGCTCTCCTGCACGAACCAGGTCCCCACTACATTTGACTCCAACTGCATCCCCATTGCCATCTCACCGGCAAACTGCTCGTGTACACTGA 1251 0.462 MGNCLDSSAKVDTAQSSRTSGSGISKTSPSSAPSTLSIPSYSEKSNASSLPTPRSEGEILSSPNLKAFTFNDLKNATRNFRPDSLLGEGGFGYVYKGWIDENTFQAARPGSGMVVAVKRLKPEGSFQGHKEWLTEVNYLGQLHHVNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWSVRMKVAIGAARGLSFLHNAKSQVIYRDFKASNILLDADFNAKLSDFGLAKAGPTGDKTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRRAVDRSKAGVELNLVDWAKPYLGDKRRLFRIMDTKLEGQYPQKGAYMAATLALQCLNSEAKARPPMTEVLATLEQIEAPKNTGRHSHSEPQRSHVPPIRGSPARTRSPLHLTPTASPLPSHRQTARVH 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0849 416 Gene3D Transferase(Phosphotransferase) domain 1 167 383 - -
Lele53g0849 416 Gene3D Phosphorylase Kinase; domain 1 56 166 - -
Lele53g0849 416 MobiDBLite consensus disorder prediction 395 409 - -
Lele53g0849 416 MobiDBLite consensus disorder prediction 1 58 - -
Lele53g0849 416 PANTHER OS01G0588500 PROTEIN-RELATED 42 365 - -
Lele53g0849 416 MobiDBLite consensus disorder prediction 367 416 - -
Lele53g0849 416 ProSiteProfiles Protein kinase domain profile. 80 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele53g0849 416 FunFam Serine/threonine-protein kinase BIK1 47 166 - -
Lele53g0849 416 ProSitePatterns Protein kinases ATP-binding region signature. 86 118 IPR017441 GO:0005524
Lele53g0849 416 Pfam Protein tyrosine and serine/threonine kinase 84 360 IPR001245 GO:0004672|GO:0006468
Lele53g0849 416 FunFam Probable serine/threonine-protein kinase PBL8 167 381 - -
Lele53g0849 416 CDD STKc_IRAK 86 364 - -
Lele53g0849 416 ProSitePatterns Serine/Threonine protein kinases active-site signature. 210 222 IPR008271 GO:0004672|GO:0006468
Lele53g0849 416 SUPERFAMILY Protein kinase-like (PK-like) 57 367 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0849 Lele-ChrLele53 18233083 18235784 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0849 12 361 Glycoside Hydrolase AT3G07070 47.875 8.37e-110 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele53g0849 PK_Tyr_Ser-Thr 4.4e-47 CL0016