Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0847 ATGAGGAAGCTGAAGCAGCAGCAGCTGGGTAAAGAAGAAGAATCTCAGAAGAAGGAGCGTCATATTGTGACGTGGACACAAGAGGAAGATGATATCTTGAGGAACCAGATAAGCATCCATGGAACTGAGAATTGGGCAATTATTGCATCTAACTTCAAAGACAAAACGACAAGACAGTGCAGAAGAAGATGGTACACTTACTTGAACTCTGATTTCAAGAAAGGAGGATGGTCACCGGAGGAAGACTTGCTCTTATGTGAGGCTCAGAAAATATTTGGTAACAGATGGACCGAAATAGCAAAGGTTGTTTCAGGCAGAACGGATAATGCTGTGAAAAACCGTTTCTCCACCCTGTGCAAGAAGAGAGCAAAATTTGAAGCCTTGGCAAAAGAGAATAACACTTCGTTCACTAATTCAAACAACAAAAGAACTATTTTCCAACAGGGTGACAGCAGAGAGTCAACATCAGAGGCTGCAGCACCACCTGCTAAGAAGATGAGGAGAGCCCATATCCCTGATGCTGCAGAAAGGATCAACTACGGAGACAGATCCCATAAGCAATATGAAGCAACAATGAAACAGCAGCCAAGAGCGCCATTTTCTATTTTGGCTCAGAACTTGCCAGATCAGCATGAAGCCTCCAATGACAAGATCAGCAGTAATGCCAATAATTGCAAGACTCAAGGAACATTTCTTAAAGAGGATGATCCAAAGATAAGTCTGTTGATGCAACAACAAGAGTTATTAAGTTCACTAACTCTAAAAGTTAATACAGATGATGTGGACCAGAGTCTTGAAGATGCATGGAAGGTGCTTCAAGAGTTTCTGAGCCAAACCAAAGAATCAGATATTCTCAAATATAAGATTTCGGATTTACAGCTCATAGATCTTAAATACATGATGGAGGAGTTGAAGAGTAGTAATGAGGGAAGCCAGCAATGTTGGAGGCAACCAGAACTATATGAAGACTCTCCAAGCAGTTCTGAATACAGTACAGGATCAACTCTTCTGCCCCATTCAGCAAGTGATAACCTGGAACACTCTCTGCTTCCGGATATTGGAACTGATCTAAAGCCTATCCAACTTGGAGATAAAAAAGGAGTTAGTGAATGTGGGAAAGAGGATTTCTCTTCTGCAACTATTGGTCAAGATATCTTTCCATCTTGTGAGGAACAGATAAGCAATGAAGGCATTGTTTCTACCTCATCAAGCACAGAGTTCAATTCCCCTCTTCAAGTTACCCCTATGTTCAGATCTTTGGCTGCAGGAATTCCCAGCCCACAGTTTTCAGAAAGTGAAAGGCACTTCCTAATGAAAACGCTTGGATTGGAGTCCCCATCCAAGAACCCAAGTTCCAACCCTTCACAACCACCACCCTGCAAAAGAGCCCTACTACAAAGTCTATAA 1407 0.4215 MRKLKQQQLGKEEESQKKERHIVTWTQEEDDILRNQISIHGTENWAIIASNFKDKTTRQCRRRWYTYLNSDFKKGGWSPEEDLLLCEAQKIFGNRWTEIAKVVSGRTDNAVKNRFSTLCKKRAKFEALAKENNTSFTNSNNKRTIFQQGDSRESTSEAAAPPAKKMRRAHIPDAAERINYGDRSHKQYEATMKQQPRAPFSILAQNLPDQHEASNDKISSNANNCKTQGTFLKEDDPKISLLMQQQELLSSLTLKVNTDDVDQSLEDAWKVLQEFLSQTKESDILKYKISDLQLIDLKYMMEELKSSNEGSQQCWRQPELYEDSPSSSEYSTGSTLLPHSASDNLEHSLLPDIGTDLKPIQLGDKKGVSECGKEDFSSATIGQDIFPSCEEQISNEGIVSTSSSTEFNSPLQVTPMFRSLAAGIPSPQFSESERHFLMKTLGLESPSKNPSSNPSQPPPCKRALLQSL 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0847 468 CDD SANT 77 118 IPR001005 -
Lele53g0847 468 Pfam Myb-like DNA-binding domain 25 84 - -
Lele53g0847 468 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 69 123 IPR017930 -
Lele53g0847 468 MobiDBLite consensus disorder prediction 308 338 - -
Lele53g0847 468 FunFam Transcription factor MYB124 17 73 - -
Lele53g0847 468 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 17 68 IPR017930 -
Lele53g0847 468 Gene3D - 76 149 - -
Lele53g0847 468 SMART sant 73 121 IPR001005 -
Lele53g0847 468 SMART sant 21 70 IPR001005 -
Lele53g0847 468 MobiDBLite consensus disorder prediction 1 20 - -
Lele53g0847 468 PANTHER MYB PROTEIN-RELATED 24 193 - -
Lele53g0847 468 ProSiteProfiles Myb-like domain profile. 25 68 IPR001005 -
Lele53g0847 468 MobiDBLite consensus disorder prediction 441 468 - -
Lele53g0847 468 CDD SANT 24 68 IPR001005 -
Lele53g0847 468 ProSiteProfiles Myb-like domain profile. 69 119 IPR001005 -
Lele53g0847 468 Gene3D - 12 73 - -
Lele53g0847 468 SUPERFAMILY Homeodomain-like 21 115 IPR009057 -
Lele53g0847 468 MobiDBLite consensus disorder prediction 146 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0847 Lele-ChrLele53 18215416 18220263 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0847 63 468 MYB Transcription Factor Family AT1G14350 52.451 1.88e-136 396
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele53g0847 Myb_DNA-bind_6 1.1e-14 CL0123