Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0826 ATGGGTACCACAAACCTGTCCCTGCTGAAAGCCCACTTTGATTCTGTCAAAGCATGTTTTGCAAATAATTTTGTTCCCGGAAACATGCTCTGGGCTCTCACTTCTCTCTCAGTTTTCATTTGCAACTTTGTTGTTTACTCGTTCGGGTTGATTCTTCAGTTTATTTTCAGAACTCAAAAAGCAGATGGAAAAAATGAGCTTTCTCCTCAACCTGAGGATTCTCAGATTGATGGGTTCAGAGAAGAGCTGATTAATTTCCTGTTTCAGTGTAACGAATATGTCAACGATTTTCCAGAAGACGGCATAAAAGAAAGTGGAGATGAAGGAACAGAGAGTTCTGTTTCAGAAAAGACAGACTCCAATAATTTTGAAGTTGGCAAGGGCAGAGAAAAAGAAGAGGAGGCAGAGGAAGAAGAAGAAGAAGGATATTTCTCTGCTTCTATGAATGAAGGAGAAGAAGAATTCGAAGCTGACACTAAAATTAACTCAGAATTTTATGATGGTGGTGTGAAAAACGAGAAAGAAGGAGCAGAGAGATCCGTTACCATAGAGGGAAGCTCCGAGGTTCATGAAAATGGTACCAGAAGAGTAGAAGAAGAAACAGAGAGCTCTGTTGCCATGAAGGATGACTTAGTTTATGAAAATAGCAAGAGAAAAGAAGAAGAGAAAGAAAGAGCAGGCATATCTGCTTTAATGGAGGATGAAGAGATTGAGAGAGAAGAAGAAGAAGAAACAGAGAGGCCTGCTTCAATCACTAATAAGTTTGAATACGTGTCAGGAAGGGATATTATTGGGTTCGTAGGAGAACCAACAACAACAATGACACTTAGTTTTCGGGAATTCTTTGTGGGTCCATATGTTTCCGACACCGAAATCTCGGAGAAAGAAAAATCTGCTGGAGCACAGAGTTTTCGAGAATTTAATTCATCTCCAAATGCCTCTCATTTGGAAATTCCAGAGCTTGAATCAGAACACAAACCAGTTTTTCAAGAAGAAACACAGAAAAAAATTTCAGAGCTCAAATCAGAGGAAGACAAATCTATTGGATCACAGAGTTTTCCAGAATTCCATCCATCTTCAAATGGCTCTGAAGCAGAAATTTCAGAGCTTAAATCAGGGCACGAACCAGTTTTTCAAGAAGAATCACATAAAGAAGCTGATCAAGAGCAGGGTTCTCCAAGTTCTCATGTAAGTCCAAGCGTTCCAGAAACAGAAATATCTGAGACTAAATCCGAAGAAGAAGAAGAAAAAGAGGGATCCATTCAAGAGCAGAGGATGTTGCATGGGCATTCTAGTTCTGATCAATTTAGCCTAAAAAGCGAGATCTTTCGAGGGAGAGATTCATCTGATGATGAAGAAGATGATTTGGATTTCATTGACAATTCAGTTGAGTCTGGTTCAGAATCAGGATCATCGAGCTCCAGTGGTCTCATATGGGCCAACAGTGACAAAACTGATGATTTAATCACATACGAGTTTCTATCATATCAGAAAGGTTTCGAAGGATTGGAGCCTGAAACCCTCAAGCTGATGCAAAAGCTAAGAGCCATAGAGGAATTCATAGAACTAGCACCTGGCAAAACTGAGAATGAAGATGAAAAGAAAGGTTTAAAAGATGAAGAAGAAGAAGATGATTTTGAATGGGATGATGATGAGTTGGTAGAACAAATGAAAATGGAAATGAGAAATGCAAGACAAGGAGGGCTTCCCACAATTTTAGAGGACGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGACAAGAAGTTAGTGAGTCCCCAAGAATGGCTGAAGATCTGAAGCCATTGAAGATTGAAGATCAGAAACTGGAATTCAAGGATCATGTCAGAGAAATCCTGAAAGTTCACAACAGTTATGAAGATAAAATGAGGAAGCTTGATATCTTGAACTACCAGACCATGCATGCCCTAGGTCTACGGCAATGGAAAGAGCCAAGTGCGAAGCCTATGATATTAAAGAATTTATTATGGTCAAGAAAAGATCAGAAGAAGTCGTCGGAGGTAGTGGTGAGGTTGGTGGAGGAGTTGGAGGGGGTGTATGTTGGCCAGCTTTGTTTGTCGTGGGAGATTCTGTGTTGGGAGTACAAGAAAGCGATTGAGTTGAAACAGTACGACGGCGAATGGGTTCGCCGGTATAATGTGGTGGCCGGAGAATTTCAACTGTTTCAAGTGCTGATGCAGAGGTTCATTGAGAATGAGCCTTTTCAAGGACCAAGGATTCACAATTATGTTAGGAACCGTTGTGTCGTTCGGAACCTCCTCCAAGTTCCCGCCATTAAAGATGATAGTATGAAGGAGATGATGACAAAGGATGAAGAAGAAGGGGTTTCAAGTGAAAGGTTAGCAGAAATCATCAGAGAATCAATGTACCTCTTCTGCAAGTTTGCTCGAGCTGACAAGCACGACGTTAACAACAACGCCTTCTTCAAACTTCCTCACCAAACCAGACCAACTCATCTCAAAGATGACCCTGCCACTTGTCATATTATTACAGACATTCAAACCCACCTCCACAAGAAGGAGAAGAGGCTGAAGGACATAGTGAGAACTGGGAATTGCATAGTGAGGAAGTTTCAGAAGCAGAGTGAAGATAAAGTGGAGCTTGATCTTGAGCAGATGCTGGCTCAGGTTCAGTTGAAGTTGATATCAAGAGTTTTGAGCATGTCAAAGTTGAGAAAGGATCAGTTAATTTGGTGTAATGACAAGTTAGGTAGGATTACTTTTGTTGACACCAAAGTCCATCGGCTCACATATCGCAAACGTCACAGCTATGCTACCAAATCCAACCAACACAGGGTTGTCAAAACCCCAGGTGGTAAGCTCGTTTATCAGACCACTAAGAAGAGGGCTAGCGGGCCCAAGTGCCCTGTAACAGGCAAGAGGATTCAAGGGATCCCACACTTGAGGCCTGCCGAATACAAAAGATCAAGGTTACCTAGAAATCGAAGGACTGTGAACCGTGCATATGGTGGAGTTTTGTCTGGAAGTGCTGTCAGAGAAAGGATCATTCGAGCCTTCTTGGTTGAAGAGCAAAAGATTGTGAAAAAGGTGTTGAAGATTCAGAAGGCCAAGGAAAAGCAATCCTTGAAGGGTTAA 3153 0.4139 MGTTNLSLLKAHFDSVKACFANNFVPGNMLWALTSLSVFICNFVVYSFGLILQFIFRTQKADGKNELSPQPEDSQIDGFREELINFLFQCNEYVNDFPEDGIKESGDEGTESSVSEKTDSNNFEVGKGREKEEEAEEEEEEGYFSASMNEGEEEFEADTKINSEFYDGGVKNEKEGAERSVTIEGSSEVHENGTRRVEEETESSVAMKDDLVYENSKRKEEEKERAGISALMEDEEIEREEEEETERPASITNKFEYVSGRDIIGFVGEPTTTMTLSFREFFVGPYVSDTEISEKEKSAGAQSFREFNSSPNASHLEIPELESEHKPVFQEETQKKISELKSEEDKSIGSQSFPEFHPSSNGSEAEISELKSGHEPVFQEESHKEADQEQGSPSSHVSPSVPETEISETKSEEEEEKEGSIQEQRMLHGHSSSDQFSLKSEIFRGRDSSDDEEDDLDFIDNSVESGSESGSSSSSGLIWANSDKTDDLITYEFLSYQKGFEGLEPETLKLMQKLRAIEEFIELAPGKTENEDEKKGLKDEEEEDDFEWDDDELVEQMKMEMRNARQGGLPTILEDEEEEEEEEEEEEEEEEEEEEEEEGQEVSESPRMAEDLKPLKIEDQKLEFKDHVREILKVHNSYEDKMRKLDILNYQTMHALGLRQWKEPSAKPMILKNLLWSRKDQKKSSEVVVRLVEELEGVYVGQLCLSWEILCWEYKKAIELKQYDGEWVRRYNVVAGEFQLFQVLMQRFIENEPFQGPRIHNYVRNRCVVRNLLQVPAIKDDSMKEMMTKDEEEGVSSERLAEIIRESMYLFCKFARADKHDVNNNAFFKLPHQTRPTHLKDDPATCHIITDIQTHLHKKEKRLKDIVRTGNCIVRKFQKQSEDKVELDLEQMLAQVQLKLISRVLSMSKLRKDQLIWCNDKLGRITFVDTKVHRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLPRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKQSLKG 1050
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0826 1050 Gene3D - 932 967 - -
Lele53g0826 1050 MobiDBLite consensus disorder prediction 302 316 - -
Lele53g0826 1050 MobiDBLite consensus disorder prediction 293 481 - -
Lele53g0826 1050 MobiDBLite consensus disorder prediction 99 114 - -
Lele53g0826 1050 Pfam Protein of unknown function (DUF1666) 694 934 IPR012870 -
Lele53g0826 1050 MobiDBLite consensus disorder prediction 462 481 - -
Lele53g0826 1050 Coils Coil 218 238 - -
Lele53g0826 1050 PANTHER OS09G0413600 PROTEIN 21 934 - -
Lele53g0826 1050 MobiDBLite consensus disorder prediction 562 614 - -
Lele53g0826 1050 MobiDBLite consensus disorder prediction 524 548 - -
Lele53g0826 1050 MobiDBLite consensus disorder prediction 425 439 - -
Lele53g0826 1050 MobiDBLite consensus disorder prediction 166 252 - -
Lele53g0826 1050 MobiDBLite consensus disorder prediction 133 147 - -
Lele53g0826 1050 ProSitePatterns Ribosomal protein L34e signature. 945 958 IPR018065 -
Lele53g0826 1050 MobiDBLite consensus disorder prediction 573 601 - -
Lele53g0826 1050 MobiDBLite consensus disorder prediction 166 233 - -
Lele53g0826 1050 MobiDBLite consensus disorder prediction 368 390 - -
Lele53g0826 1050 MobiDBLite consensus disorder prediction 391 405 - -
Lele53g0826 1050 MobiDBLite consensus disorder prediction 99 150 - -
Lele53g0826 1050 MobiDBLite consensus disorder prediction 351 367 - -
Lele53g0826 1050 Coils Coil 569 605 - -
Lele53g0826 1050 Gene3D - 969 1050 - -
Lele53g0826 1050 Pfam Ribosomal protein L34e 932 1026 IPR008195 GO:0003735|GO:0005840|GO:0006412
Lele53g0826 1050 MobiDBLite consensus disorder prediction 318 350 - -
Lele53g0826 1050 PRINTS Ribosomal protein L34 signature 956 973 IPR008195 GO:0003735|GO:0005840|GO:0006412
Lele53g0826 1050 PRINTS Ribosomal protein L34 signature 943 956 IPR008195 GO:0003735|GO:0005840|GO:0006412
Lele53g0826 1050 PRINTS Ribosomal protein L34 signature 974 984 IPR008195 GO:0003735|GO:0005840|GO:0006412
Lele53g0826 1050 PRINTS Ribosomal protein L34 signature 996 1018 IPR008195 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0826 Lele-ChrLele53 18015520 18022547 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0826 932 1049 Cytoplasmic Ribosomal Protein Gene Family AT1G69620 90.678 4.60e-64 210