Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele53g0815 | ATGGCTTCTGAAGCCGATGTTTCTGAGAATTCGTCCCTCTTTGACAGCTCGTTTGGATTCAGAGAGTTCTCTGTTTTCTTACCCTTCATCTTAGGCTTCTCCACCGATTCTTCCAGACAAGACAGTCGAGACCCAGATCAGGAAACTACAAATTCAGAAACTAGTAACACCCATGGCGAAAGAGTCGTCTTGATCAACCCCTTTACGCAAGGCATGGTGGTGATTGACGATAATTCGAGCCTTGAGACTCTGTTCCACGAAATTGGTATGAAAAATGGGCAACCGCCGGCGTCGAAGGAATCTATAGACGCGATGCCGAGTGTGGAAATCGGAGAAGGAGAAGGCGGCGGCGAGTGTGTGATTTGTTTGGAGGAATGGGAGGTTGGTGGGGTGTCGAAAGAGATGCCTTGTAAGCACAAGTTTCATCAGAACTGTATAGAGAAGTGGTTAGGAATCCATGGGTCTTGCCCCATTTGTAGATACCAGATGCCTGTGGATGAGAAAGAAGTGGGCAAGAGAGAGGAAGATGAACAAGAAGCAGGAGAAGGAGGAGAGAGAAGGAGGGTTGGCAGAGAAATTTGGGTGAGCTTCTCCTTTAGAAGTCAGAATACGAACCAAGCTCCTTCTGATAATTCCAGTGACCCTTCATCAAGTCCAAGAAGTGATTCTGAGGTAGATAATTAG | 684 | 0.4693 | MASEADVSENSSLFDSSFGFREFSVFLPFILGFSTDSSRQDSRDPDQETTNSETSNTHGERVVLINPFTQGMVVIDDNSSLETLFHEIGMKNGQPPASKESIDAMPSVEIGEGEGGGECVICLEEWEVGGVSKEMPCKHKFHQNCIEKWLGIHGSCPICRYQMPVDEKEVGKREEDEQEAGEGGERRRVGREIWVSFSFRSQNTNQAPSDNSSDPSSSPRSDSEVDN | 227 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele53g0815 | 227 | ProSiteProfiles | Zinc finger RING-type profile. | 119 | 160 | IPR001841 | - | |
Lele53g0815 | 227 | SUPERFAMILY | RING/U-box | 118 | 165 | - | - | |
Lele53g0815 | 227 | FunFam | E3 ubiquitin-protein ligase RNF181 | 85 | 166 | - | - | |
Lele53g0815 | 227 | MobiDBLite | consensus disorder prediction | 199 | 220 | - | - | |
Lele53g0815 | 227 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE PRAJA | 35 | 164 | - | - | |
Lele53g0815 | 227 | SMART | ring_2 | 119 | 159 | IPR001841 | - | |
Lele53g0815 | 227 | MobiDBLite | consensus disorder prediction | 36 | 61 | - | - | |
Lele53g0815 | 227 | MobiDBLite | consensus disorder prediction | 199 | 227 | - | - | |
Lele53g0815 | 227 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 84 | 166 | IPR013083 | - | |
Lele53g0815 | 227 | MobiDBLite | consensus disorder prediction | 168 | 187 | - | - | |
Lele53g0815 | 227 | Pfam | Ring finger domain | 118 | 160 | IPR001841 | - | |
Lele53g0815 | 227 | CDD | RING-H2_PA-TM-RING | 119 | 160 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele53g0815 | Lele-ChrLele53 | 17942466 | 17943149 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele53g0815 | 1 | 199 | C3H Transcription Factor Family | AT1G26800 | 47.573 | 4.32e-58 | 181 |