Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0814 ATGGATCTGCAAAACTTGCAAAATCAAAGCATGCATCTGGTTATCTCCACTGATGCAAAGCCTAGGCTGAAATGGACTCCTGAGCTTCACCAACGATTTCTTGACGCCATTAATCAGCTTGGCGGGGCAGACAAAGCAACACCCAAGAGTCTTTTGAGAGCGATGGGCATTCCAGGGCTTACTTTGTACCACCTGAAGAGCCACTTACAGAAATTCAGGCTTGGAAAAGGCCAGCAACTAGAAACCTGCTCTGACAGTAGTAAACAAGAAGACAACAGAGAAATCCAGAGCAGTGCCAGCCATTGCAAAAGGGAAATCTGTGTTGGGACCCAGAATCAGATGACTGACTTGCAGATAGCGCAGGCTCTTCAAATGCAAATGCAAGTACAGGGAAAACTTTATGAACAACTTGAGGTGCAGAGGCATTTGCAGCTTCGAATTGAAGCTCAAGGGAAGTATTTACAATCAGTGCTCAAGAAAGCGCAGGACACACTTGCTACTTATAGTTTTTCTTCCACTTCTGATACACAAGTTGCAAAAGCTGAGCTTTCTCGGTTAGTGTCCATGATCAACAATGCTTGTCCAAGTTCTCCGATCTCAGAACTAACAGAAACAAGAGGGTTGAGTTCTAAAGATGGGAAGGGGAAGCAAAGCAGAGGGATCATGTGTTCACTGGAAAGTTCTTTGACAACATCTGAGAGCTCTGGAATAAAGGAAGACAAGAAGCAGCACAAGGATGAAACAGAAGACCTTCAAAAATCTAATAGTACTACTTCAGTTAAATTTCCATTAATGGCCATTCTTTCAGCGGATGAAGCATTAAATGGGGATGCAAGTGATGAACCTAGTGGGAGAAGGAGAAGTGGAGGAGCTAATTATGATGGGGAAACATGTGCTAAGAAGCAGAGAAAAATTGAATTGTCAGAAATGCTTGACTTGAACAGGCAATACCAGAGTGATATTGATTCAAATTCTAAGGCTATTGATTTGAATCACTGTTAA 1002 0.4261 MDLQNLQNQSMHLVISTDAKPRLKWTPELHQRFLDAINQLGGADKATPKSLLRAMGIPGLTLYHLKSHLQKFRLGKGQQLETCSDSSKQEDNREIQSSASHCKREICVGTQNQMTDLQIAQALQMQMQVQGKLYEQLEVQRHLQLRIEAQGKYLQSVLKKAQDTLATYSFSSTSDTQVAKAELSRLVSMINNACPSSPISELTETRGLSSKDGKGKQSRGIMCSLESSLTTSESSGIKEDKKQHKDETEDLQKSNSTTSVKFPLMAILSADEALNGDASDEPSGRRRSGGANYDGETCAKKQRKIELSEMLDLNRQYQSDIDSNSKAIDLNHC 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0814 333 Pfam Myb-like DNA-binding domain 22 71 IPR001005 -
Lele53g0814 333 FunFam Two-component response regulator 16 79 - -
Lele53g0814 333 Gene3D - 19 77 - -
Lele53g0814 333 Pfam MYB-CC type transfactor, LHEQLE motif 117 163 IPR025756 -
Lele53g0814 333 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 20 75 IPR006447 GO:0003677
Lele53g0814 333 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 7 250 IPR044848 GO:0003700
Lele53g0814 333 MobiDBLite consensus disorder prediction 273 297 - -
Lele53g0814 333 SUPERFAMILY Homeodomain-like 19 74 IPR009057 -
Lele53g0814 333 MobiDBLite consensus disorder prediction 235 252 - -
Lele53g0814 333 MobiDBLite consensus disorder prediction 194 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0814 Lele-ChrLele53 17940205 17941749 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0814 11 267 G2-like Transcription Factor Family AT1G69580 51.866 5.80e-71 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lele53g0814 Myb_DNA-binding 2.3e-06 CL0123