Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0812 ATGAAGGCCACTTGGCGAAACTGCCTCATATATTCTTCACAAGAACACTCCAATGCTCTTACCTGTTCTGATCTCTCGTCTTCTTCCATGGGGATGGTTTATGCAGACATGGGCTCTCTCTCTCTCTCTTCTTCTGAAGTGGGAAATACCAATATTGGGGGAACCAGCTGGGTTACTATTCCCTTTATTAGGGATCATCACCTTCTCAACAACAACAATGCCATCACCGATCATATTGATAATGATGCTTTGGAGTGTAAAGCTTCTGAATCTAGTACTGATCACGAGAATCTCATAGATCATACCCAAGAAAACCCTAATGAGAATTCTGGTGTCAGTACGGGAAAAGAAGCTGATTCTGGCCAGTCCAAGCTTTGTGCACGAGGCCATTGGAGACCTGCAGAAGATGCCAAGCTCAAGGAGCTCGTTGCCCTTTATGGCCCTCAGAACTGGAACCTTATAGCAGAAAAATTGGAAGGAAGATCAGGTAAGAGCTGTAGGCTGAGGTGGTTCAACCAGTTGGATCCGAGGATAAACAGGAGAGCATTCAGTGAGGAGGAAGAAGATAGATTAATGCAGGCACATAGGATATATGGGAACAAATGGGCCATGATTGCGAGGCTATTCCCAGGAAGAACAGATAACGCAGTGAAGAATCACTGGCATGTTATAATGGCAAGGAAGTATAGAGAACAATCAAGTGCTTACAGAAGGAGAAGATTAAGCCAATCTGCAAGTTACACAAGATCATCAATGGAGGACCAGAATTCAAGTAGAGGAAGCTCAGGGACTACAGAACCGCTACCACCTCCGCCTTATTTTCTTGTTCATAATAACAATAACGTTATGGCTAGTTTTCCATATGCTCACTTCCATGGAGCTAATGGTGGGGTTGACTATGGCTACCATGCTTCTTCTTCTTCACCCCACATGACTGCTGGATTAGAAGCATTCTACAGCACCTGCAAACAGGCCCCTCACACTCACAACGCCTTTTATTCTCATCATCATCGTCCATCTTTTGATGTCATCCCAGGTGTTAGAGGCAATGAAATGGTGGGAGGGGGTTTTGGGCAGAGTATATACAGGGAAAACAGGCCAAGTGATTATGAACTTCATTCTCTCAATGGCTTCTTCTATCCTCAAGAAGATAATTTCAACCCATATATGATGCCAATAATGCAGCAGCAGCAGCAACCAACACAGTCAAACTCAAACATAATGAATCCCAGTTTTCACAGCTTCTCATCATCAAATTCCATGCCTCCAAATGTTTGCTCCGGCGAACCATCATCATCAGAGAACAGAGATAAAGTTGTACTGAATCGCCCTTCTCCTCCATTTATCGACTTTCTCGGGGTAGGAGCCACATAA 1374 0.4418 MKATWRNCLIYSSQEHSNALTCSDLSSSSMGMVYADMGSLSLSSSEVGNTNIGGTSWVTIPFIRDHHLLNNNNAITDHIDNDALECKASESSTDHENLIDHTQENPNENSGVSTGKEADSGQSKLCARGHWRPAEDAKLKELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSEEEEDRLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSSAYRRRRLSQSASYTRSSMEDQNSSRGSSGTTEPLPPPPYFLVHNNNNVMASFPYAHFHGANGGVDYGYHASSSSPHMTAGLEAFYSTCKQAPHTHNAFYSHHHRPSFDVIPGVRGNEMVGGGFGQSIYRENRPSDYELHSLNGFFYPQEDNFNPYMMPIMQQQQQPTQSNSNIMNPSFHSFSSSNSMPPNVCSGEPSSSENRDKVVLNRPSPPFIDFLGVGAT 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0812 457 Pfam Myb-like DNA-binding domain 180 223 IPR001005 -
Lele53g0812 457 Pfam Myb-like DNA-binding domain 128 174 IPR001005 -
Lele53g0812 457 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 128 174 IPR017930 -
Lele53g0812 457 PANTHER MYB PROTEIN-RELATED 128 272 - -
Lele53g0812 457 SUPERFAMILY Homeodomain-like 128 221 IPR009057 -
Lele53g0812 457 ProSiteProfiles Myb-like domain profile. 175 225 IPR001005 -
Lele53g0812 457 MobiDBLite consensus disorder prediction 90 124 - -
Lele53g0812 457 FunFam MYB transcription factor 128 179 - -
Lele53g0812 457 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 175 229 IPR017930 -
Lele53g0812 457 SMART sant 179 227 IPR001005 -
Lele53g0812 457 SMART sant 127 176 IPR001005 -
Lele53g0812 457 CDD SANT 131 172 IPR001005 -
Lele53g0812 457 ProSiteProfiles Myb-like domain profile. 128 174 IPR001005 -
Lele53g0812 457 FunFam MYB transcription factor 181 252 - -
Lele53g0812 457 Gene3D - 128 179 - -
Lele53g0812 457 Gene3D - 181 256 - -
Lele53g0812 457 MobiDBLite consensus disorder prediction 235 271 - -
Lele53g0812 457 CDD SANT 182 222 IPR001005 -
Lele53g0812 457 MobiDBLite consensus disorder prediction 414 439 - -
Lele53g0812 457 MobiDBLite consensus disorder prediction 238 264 - -
Lele53g0812 457 MobiDBLite consensus disorder prediction 103 120 - -
Lele53g0812 457 MobiDBLite consensus disorder prediction 414 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0812 Lele-ChrLele53 17919335 17921020 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0812 101 240 MYB Transcription Factor Family AT1G69560 74.497 8.34e-75 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele53g0812 Myb_DNA-binding 1.7e-14 CL0123