Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0811 ATGGGTCGAATCCTCGATATGTATCCCCAGCTTCTCACATGGGACCCCTATTTTGATCTCTACCCTGTTTTCGATTTCTTATTGAATGAAGTTGCAATTCCGTTCCCTGATATTCGTAAAGCGATTATACGCTGCCCGAGGCTATTGGTCTGCAGCGTGGATGAGCAACTCAGACCGACTTTGAACTTCTTGAGGAATTTAGGGTTTGTGGGACCCAATTCCATCAATTACCAGACCGCATTGCTGCTGGTTTCAAGTGTGGAGGGTACCCTTACGCCCAAAATTGAGTATTTGCAGAGTCAGGGGTTCTCTTACGAGGAGGTGGAGATGAATGGGGATATAGCTCAACTGAAGAGATTTCCACAGTATTTTTCGTTTAGTTTGGAGAAGAAGATTAAGCCAAGGCATAGACTATTACTCAAGCACGGCTTTACGTTTCCTTTGGCCGAGATGTTAAAGGTTAGTGATGGCGAGTTCGGCGTTAGGTTAGTTGAAATGCAACTACAGTCACTTGAGGGAAGGTAG 525 0.4514 MGRILDMYPQLLTWDPYFDLYPVFDFLLNEVAIPFPDIRKAIIRCPRLLVCSVDEQLRPTLNFLRNLGFVGPNSINYQTALLLVSSVEGTLTPKIEYLQSQGFSYEEVEMNGDIAQLKRFPQYFSFSLEKKIKPRHRLLLKHGFTFPLAEMLKVSDGEFGVRLVEMQLQSLEGR 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0811 174 Gene3D Transcription termination factor 3, mitochondrial 1 172 IPR038538 -
Lele53g0811 174 Pfam mTERF 109 159 IPR003690 GO:0003690|GO:0006355
Lele53g0811 174 Pfam mTERF 36 110 IPR003690 GO:0003690|GO:0006355
Lele53g0811 174 PANTHER CGI-12 PROTEIN-RELATED 2 106 IPR003690 GO:0003690|GO:0006355
Lele53g0811 174 SMART mt_12 114 145 IPR003690 GO:0003690|GO:0006355
Lele53g0811 174 SMART mt_12 2 34 IPR003690 GO:0003690|GO:0006355
Lele53g0811 174 SMART mt_12 73 104 IPR003690 GO:0003690|GO:0006355
Lele53g0811 174 SMART mt_12 39 70 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0811 Lele-ChrLele53 17903948 17904556 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele53g0811 mTERF 1.5e-06 No_clan