Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0801 ATGGTGAAGCCATCGTCGTGCTGCGAGAAACTAGTAGGGTTAAAGAAAGGGCCATGGACTTCTGAAGAAGACCAGAAGCTCATGGCCTATATTCAACAACACGGCCATGGAAACTGGTCTTCCTTGCCTGCTACAGCTGGACTCCAGAGATGCGGGAAGAGCTGCAGATTGAGATGGATTAATTACTTAAGGCCTGACATCAAACGAGGCAATTTTAGCTCAAAAGAAGATCAAACCATTATTCAACTTCATGCTCTTCTTGGTAACAAATGGTCAGCCATAGCACATCACTTGCCAAAGAGAACAGACAATGAAATCAAGAACTACTGGAACACCTGCCTTAAGAAGAGGCTCACCAGAATGGGTATCAACCCTAACACCCACAAGCCCATCAACACCGCCGTTAACGGCCAGCAGTCGAAGGACTCAACCAACCTCGGCCATATGGCTCAGTGGGAGACTGCTCGGCTCGAAGCCGAAGCCAGGCAACTGTTTGATAAAAGTAATCCAGGCATTCTCAAGCTCAATTGGAGGTCTCTACTCTCTAATGGAACTAAGAAAGGGAAGAAGAAGAATGTTTGA 582 0.4674 MVKPSSCCEKLVGLKKGPWTSEEDQKLMAYIQQHGHGNWSSLPATAGLQRCGKSCRLRWINYLRPDIKRGNFSSKEDQTIIQLHALLGNKWSAIAHHLPKRTDNEIKNYWNTCLKKRLTRMGINPNTHKPINTAVNGQQSKDSTNLGHMAQWETARLEAEARQLFDKSNPGILKLNWRSLLSNGTKKGKKKNV 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0801 193 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Lele53g0801 193 ProSiteProfiles Myb-like domain profile. 14 63 IPR001005 -
Lele53g0801 193 Gene3D - 15 68 - -
Lele53g0801 193 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Lele53g0801 193 FunFam MYB transcription factor 70 131 - -
Lele53g0801 193 CDD SANT 18 63 IPR001005 -
Lele53g0801 193 Pfam Myb-like DNA-binding domain 69 113 IPR001005 -
Lele53g0801 193 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Lele53g0801 193 CDD SANT 71 112 IPR001005 -
Lele53g0801 193 Gene3D - 71 146 - -
Lele53g0801 193 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 63 IPR017930 -
Lele53g0801 193 SUPERFAMILY Homeodomain-like 13 110 IPR009057 -
Lele53g0801 193 SMART sant 15 65 IPR001005 -
Lele53g0801 193 SMART sant 68 116 IPR001005 -
Lele53g0801 193 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 5 169 - -
Lele53g0801 193 FunFam MYB-related transcription factor 15 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0801 Lele-ChrLele53 17834168 17835973 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0801 5 162 MYB Transcription Factor Family AT3G01140 74.375 4.15e-83 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele53g0801 Myb_DNA-binding 5.1e-14 CL0123