Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0799 ATGGTGAAGTGGTCGTGCGGCGGCGAGAAGTCAGCGTTAAAGAAAGGGCCATGGACTCATGAAGAAGACCAGACGCTCATGGCTTACATCCAACAACATGGTCATGGAAGCTGGTCTTCCTTGCCTGCTAAAGCTGGGGGAATACAATCATGGAATTCGAATGAAGAAGCTATTTCTTTTTCACGATTCACTGCTTTATTGAGATGTTCGGCTAGTGTCTATGAAATGCATACGTTGAAAGCTTATTGTCTTGTTTGTCCTTTGGTGCTTGACCCCAGGAGACCTTTACTGTTTGCTGTTGATGATGATGGCTGCTTTACTGTCAAAAGCACTGACTTTAGTGGCTGCTATATTAAAGATGCAGATAAGGATATTGTTGAAGCGATGAAGGACTTGTCACCAAAACAAAAGTCATTGTTCTTATCGCCATGA 432 0.4329 MVKWSCGGEKSALKKGPWTHEEDQTLMAYIQQHGHGSWSSLPAKAGGIQSWNSNEEAISFSRFTALLRCSASVYEMHTLKAYCLVCPLVLDPRRPLLFAVDDDGCFTVKSTDFSGCYIKDADKDIVEAMKDLSPKQKSLFLSP 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0799 143 CDD SANT 17 47 IPR001005 -
Lele53g0799 143 SUPERFAMILY ValRS/IleRS/LeuRS editing domain 94 132 IPR009008 GO:0002161|GO:0006418
Lele53g0799 143 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 47 IPR017930 -
Lele53g0799 143 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 72 - -
Lele53g0799 143 Gene3D - 12 76 - -
Lele53g0799 143 SUPERFAMILY Homeodomain-like 10 44 IPR009057 -
Lele53g0799 143 Pfam Myb-like DNA-binding domain 15 46 IPR001005 -
Lele53g0799 143 ProSiteProfiles Myb-like domain profile. 10 67 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0799 Lele-ChrLele53 17800160 17808163 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0799 9 46 MYB Transcription Factor Family AT3G01140 73.684 3.63e-14 66.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele53g0799 Myb_DNA-binding 1.5e-06 CL0123