Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0788 ATGAGCTCCGACACGTCCACCGGTGGCGGTTCTTCCAGCGGTTCTTCCTCGGCGGCTGGCAGGGACAAGAAGAGGGAGAAGGCTAAAGTGAGTCGCACTTCCATGATACTATGGCATTCGCACCAAAACGATGCCGCCGCTGTTCGGAAGCTTCTGGAGGAAGATCCGTCGCTTGTGAAGGCCAGAGACTACGATAATCGAACTCCACTTCATGTGGCTTCTCTCCATGGTTGGATTGACGTTGCTAAGTGCTTGATTGAATTTGGCGCCGATGTTAACTCTCAGGATCGTTGGAGAAACACTCCTCTAGCCGATGCAGAAGGGGCTCAAAAGTATAGTATGATGGAGCTTTTAAAATCATATGGAGGCTTGTCTTATGGCCAAAGTGGAAGCCACACTGAACAGAAGTCCGTTCCACCCCCATTGACTAACAAGTGTGATTGGGAAGTCGATCCTAATGAGCTGGACTTCTCACATTCAGTTCGTATTGGAAAGGGATCTTTTGGTGAGATTTTAAAAGCCCATTGGCGTGGGACACCAGTTGCTGTCAAACGCATTCTTCCATCTCTTTCAGATGATAAATTAGTGATCCAGGACTTCAGGCATGAGGTTAATTTGTTAGTGAAGCTTCGACATCCAAATGTAGTACAGTTTCTTGGAGCTGTTACAGAGAAGAAACCTCTTATGTTAATTACTGAATATCTTAGAGGGGGTGATCTTCATCAGCATCTTAAGGAAAAAAGTTCAATTAGTCCATCGACAGCTGTCAACTTTGCGTTAGATATTGCCAGAGGGATGGCTTATCTTCACAACGAACCAAATGTTATAATTCATCGAGACCTTAAGCCAAGGAATGTTCTTTTAGTCAATTCTAGTGCAGAGCATTTAAAAGTCGGAGATTTTGGACTGAGCAAGCTTATCAAGGTCCAAAGTTCTCATGACGTTTACAAGATGACTGGTGAAACCGGAAGCTACCGGTATATGGCTCCTGAAGTATTCAAACACAGGAAATACGATAAGAAGGTTGATGTCTTCTCCTTTGCTATGATACTGTACGAGATGCTCGAAGGGGAACCAGCTTTTGCAAATTTTGAGCCTTATGATGGAGCCAAACATGTGGCAGAAGGACACAGACCAACTATGCGGGCAAAGGGTTATATCCCTGAACTGCGAGAGTTAACAGAACAGTGCTGGTCAGCTGATTACCATCAAAGACCTTCATTCTTGGAGATCCTTAAACGACTTGAGAAGATCAAAGAAAATAATCTACCTTCAGAGCATCACTGGAAATTGTTCTCTTCCTAA 1305 0.4437 MSSDTSTGGGSSSGSSSAAGRDKKREKAKVSRTSMILWHSHQNDAAAVRKLLEEDPSLVKARDYDNRTPLHVASLHGWIDVAKCLIEFGADVNSQDRWRNTPLADAEGAQKYSMMELLKSYGGLSYGQSGSHTEQKSVPPPLTNKCDWEVDPNELDFSHSVRIGKGSFGEILKAHWRGTPVAVKRILPSLSDDKLVIQDFRHEVNLLVKLRHPNVVQFLGAVTEKKPLMLITEYLRGGDLHQHLKEKSSISPSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSAEHLKVGDFGLSKLIKVQSSHDVYKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPAFANFEPYDGAKHVAEGHRPTMRAKGYIPELRELTEQCWSADYHQRPSFLEILKRLEKIKENNLPSEHHWKLFSS 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0788 434 CDD STKc_MAP3K-like 163 415 - -
Lele53g0788 434 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 49 420 - -
Lele53g0788 434 ProSitePatterns Serine/Threonine protein kinases active-site signature. 276 288 IPR008271 GO:0004672|GO:0006468
Lele53g0788 434 PIRSF ILK 1 434 - -
Lele53g0788 434 Gene3D Phosphorylase Kinase; domain 1 138 236 - -
Lele53g0788 434 Gene3D Transferase(Phosphotransferase) domain 1 237 431 - -
Lele53g0788 434 MobiDBLite consensus disorder prediction 1 18 - -
Lele53g0788 434 ProSiteProfiles Ankyrin repeat region circular profile. 65 97 - -
Lele53g0788 434 FunFam Integrin-linked protein kinase family 236 432 - -
Lele53g0788 434 Gene3D - 7 130 IPR036770 -
Lele53g0788 434 SUPERFAMILY Ankyrin repeat 34 122 IPR036770 -
Lele53g0788 434 ProSitePatterns Protein kinases ATP-binding region signature. 163 184 IPR017441 GO:0005524
Lele53g0788 434 ProSiteProfiles Ankyrin repeat profile. 65 97 IPR002110 GO:0005515
Lele53g0788 434 ProSiteProfiles Protein kinase domain profile. 157 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele53g0788 434 SMART serkin_6 157 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele53g0788 434 Pfam Protein tyrosine and serine/threonine kinase 162 415 IPR001245 GO:0004672|GO:0006468
Lele53g0788 434 MobiDBLite consensus disorder prediction 1 32 - -
Lele53g0788 434 FunFam serine/threonine-protein kinase STY46-like 150 236 - -
Lele53g0788 434 Pfam Ankyrin repeats (3 copies) 38 96 IPR002110 GO:0005515
Lele53g0788 434 SUPERFAMILY Protein kinase-like (PK-like) 156 424 IPR011009 -
Lele53g0788 434 SMART ANK_2a 65 94 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0788 Lele-ChrLele53 17739166 17743903 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0788 1 434 MAP Kinase Kinase Kinase AT1G14000 79.819 0.0 723
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Lele53g0788 PK_Tyr_Ser-Thr 8.4e-63 CL0016