Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0785 ATGGAAGAAACAGAGGAGTCCAATGGCAAGAAGAAATTCACAGCCCGAAGAAGAAGAAGCTTGGGGTTTGGAGCAAACTCTCATGAGCATTATTATTATCAGAATCATAATCAGTTTGGTGGTTTATGTGACCAGAATAAGTACCAGAGTTACTGTCCGGCTCTTCTTCCTCTGCCTTCTCTTTTACCTCTTCAACTAGCTTTGACGCCACCGTTTCCTCAAAACCAAACCATCAAATCCAAAACCCATTTCCAGAAATATCCATGCAAACTCAATAATAACTCTCCTTCAGCTGCTTCCTCAGATGACAACAACAAGGCCTCATCAGAAGAATCCACTGTTTCTCCTGGTAACTTTAATCCTCTGTTCTTTCAATTTCTCCCTTCTTTAGGCTCTGTTTATTTGCATACAACTCAGGTGGGGCTTCAAGTTCAAGCCAAAGCCAAGACATCCCTTGAAGGAGATCAAGGGAAGAAATTTATTCCTGCAAGAAAACCACAGGCATTAATTGCTGCAAAAAGACCAGACTCTGGTGGCAAAGAAGGTTCTGTGATCTCTCTTCTCGCCAACCACTTCCTCGTGAAATTTGATTCGTCGCAAAAGATATACCATTACAATGTTGAAATTACTCCTAGTCCCTCCAAGGAAGTTGCCAGAGAAATCAAACAGAAATTGGTTAACAACAATTCTGTGAGTTTTTCTGATTCTGTGCCTGCATATGATGGGAGGAAGAATCTTTACAGCTCAGTGAAATTCCAAAATGATAAGCTTGACTTCTACATAAACCTTCCAATCCACTCTAGCAAATCAGCATTACCTTATGGAGAAATCTGTGACTGGAAAGAGAAGAAAGAACAGCTTAAACTGTTTAGGATAAATATCAAATTAGTTTCTAAGATCAATGGGAAGGAATTGAGTAACTACTTGAGCAAAGAGGGAAATGATTGGGTCCCACTTCCACAGGATTATCTTCATGCTTTGGATGTAGTTCTGAGGGAGAACCCGACCGAGAAGTGTGTGCCTGTAGGTAGATCATTTTATTCAAATTCAATGGGAAAAACTAGGGAGATAGGAGGAGGAGCTGTTGGATTCAGAGGTTTCTTTCAGAGTCTTAGGCCAACACAACAAGGACTTGCCCTCAATGTAGATTTCTCTGTGACTGCATTCCATGAGAGCATCGGAGTTATTCCATACTTGCAGAAGCGACTCGAGTCTCTTTGGGATCTTTCTCTAAGGAAGACAACAAGTTTAACTGGTGAAGAAAGGAAGGAAGTGGAGAAGGCATTGAAGAATATCAGGGTCTTTGTTTGCCATAGAGAAACCTTGCAGAGATACCGAGTCCATGGCTTAACCGAAGAAACAACAGAAAATCTTTGGTTTGCTGACAGGGATGGAAAGAATTTAAGGCTTGTAAGTTATTTCAAAGATCACTATAACTATGACATTCAATTCAGAAAATTGCCATGCTTGCAAATCGGTAGGAGTAAACCATGTTATCTCCCCATGGAGCTTTGTGTGATCTGTGAAGGTCAGAAATTTCTTGGCAAGCTGTCTGATGATCAGACAGCAAAGATACTGAAGATGGGCTGCCAAAGACCAAGAGAACGGAAAGCCATCATTGAAGGCGTCATGAGAGGGAATGTAGGACCTACCAGTGGCAACCAGGAAGGAGAATTCAAACTCGAAGTGTCACGCAAAATGACAAGGCTGACCGGTAGGATTCTTCACCCTCCCAAGCTGAAGCTCGGAGATGGAGGTCGAGTTAGAAATCTGTTTCCTTCCCGTCATGACCGCCAGTGGAACCTTCTTGATGGCCATGTCTTTGAAGGAACTAAAATTGAACGGTGGGCACTGATAAGTTTTGGGGGCACACCAGAGCAAAAGACTAATATCCCAAGATTCATAAACCAGCTATCTCAAAGGTGTGAACAATTGGGAATTTTCCTTAACAAGAATACAATCATTAGTCCTCAGTTTGAATCAAGTCAGGTTCTTAACAATGTTAACCTTTTGGAATCTAAGCTCAAGAAAATCCAGGGAGCTGCCTCAACCAATCTCCAGCTGCTTATTTGCATAATGGAGAAAAAACATAAAGGATATGCAGACCTGAAACGAATCGCTGAGACTAGTGTTGGGGTTGTAAGCCAATGCTGCTTGTATCCAAATCTCATCAAGCTAAGTTCACAGTTTTTGGCTAATTTGGCCTTAAAAATCAATGCCAAGGTTGGTGGATGCACAGTTGCTCTTTACAATTCTCTTCCTTCTGAAATCCCAAGACTGTTTCAGATTGATGAGCCAGCCATTTTTATGGGTGCTGATGTAACACATCCTCATCCACTCGACGATTTCAATCCATCTATCGCCGCTGTTGTTGGCAGCATGAACTGGCCAACAGCAAACAAATACATCTCAAGAATAAGGTCTCAAACACACAGACAAGAGATCATCCAGGATCTTGGTGCAATGGTGGGTGAATTGCTTGATGATTTTTATCAGGAAGTAAAGAAACTTCCTGGGAGAATAATCTTCTTCAGAGATGGGGTTAGTGAAACACAGTTTTATAAAGTACTGGAAGAGGAATTGCAATCCATCAGAGTGGCGTGTTCCAAATTTCCTGATTACAAACCATTCATTACTTTTGCGGTAGTACAGAAGAGGCACCATACAAGGTTGTTTCCTGTTGAAACAGATCAATCCTCCAACCAAAACCATTTTTTATATGAGAATATTCCCCCGGGGACTGTGGTTGATTCTGTGATCACTCACCCAAAAGAATTTGATTTCTATCTGTGCAGCCACTGGGGTGTGAAAGGAACAAGCAGGCCAACTCATTACCATGTTCTGTGGGATGAAAACCAGTTCACTTCTGATGAACTACAGAAGCTGGTATACAATTTATGTTACACTTTTGTGAGATGCACCAAGCCAATTTCTTTGGTCCCACCAGCTTATTATGCACATTTGGCTGCTTACAGAGGTAGACTCTACCTAGAGAGATCAGAGTCTTCAGCTTTATACAGAAGTTCATCTACATTATCAAGACCTGCCCCTCCAAAGATAGCTCCTTTACCAAGACTCAGTGAAAACATCAAGAAGCTCATGTTCTACTGCTAA 3114 0.4165 MEETEESNGKKKFTARRRRSLGFGANSHEHYYYQNHNQFGGLCDQNKYQSYCPALLPLPSLLPLQLALTPPFPQNQTIKSKTHFQKYPCKLNNNSPSAASSDDNNKASSEESTVSPGNFNPLFFQFLPSLGSVYLHTTQVGLQVQAKAKTSLEGDQGKKFIPARKPQALIAAKRPDSGGKEGSVISLLANHFLVKFDSSQKIYHYNVEITPSPSKEVAREIKQKLVNNNSVSFSDSVPAYDGRKNLYSSVKFQNDKLDFYINLPIHSSKSALPYGEICDWKEKKEQLKLFRINIKLVSKINGKELSNYLSKEGNDWVPLPQDYLHALDVVLRENPTEKCVPVGRSFYSNSMGKTREIGGGAVGFRGFFQSLRPTQQGLALNVDFSVTAFHESIGVIPYLQKRLESLWDLSLRKTTSLTGEERKEVEKALKNIRVFVCHRETLQRYRVHGLTEETTENLWFADRDGKNLRLVSYFKDHYNYDIQFRKLPCLQIGRSKPCYLPMELCVICEGQKFLGKLSDDQTAKILKMGCQRPRERKAIIEGVMRGNVGPTSGNQEGEFKLEVSRKMTRLTGRILHPPKLKLGDGGRVRNLFPSRHDRQWNLLDGHVFEGTKIERWALISFGGTPEQKTNIPRFINQLSQRCEQLGIFLNKNTIISPQFESSQVLNNVNLLESKLKKIQGAASTNLQLLICIMEKKHKGYADLKRIAETSVGVVSQCCLYPNLIKLSSQFLANLALKINAKVGGCTVALYNSLPSEIPRLFQIDEPAIFMGADVTHPHPLDDFNPSIAAVVGSMNWPTANKYISRIRSQTHRQEIIQDLGAMVGELLDDFYQEVKKLPGRIIFFRDGVSETQFYKVLEEELQSIRVACSKFPDYKPFITFAVVQKRHHTRLFPVETDQSSNQNHFLYENIPPGTVVDSVITHPKEFDFYLCSHWGVKGTSRPTHYHVLWDENQFTSDELQKLVYNLCYTFVRCTKPISLVPPAYYAHLAAYRGRLYLERSESSALYRSSSTLSRPAPPKIAPLPRLSENIKKLMFYC 1037
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0785 1037 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 167 1000 - -
Lele53g0785 1037 SUPERFAMILY PAZ domain 387 545 IPR036085 GO:0005515
Lele53g0785 1037 CDD PAZ_argonaute_like 395 508 - -
Lele53g0785 1037 Gene3D - 760 1037 IPR036397 GO:0003676
Lele53g0785 1037 ProSiteProfiles PAZ domain profile. 400 509 IPR003100 GO:0005515
Lele53g0785 1037 SUPERFAMILY Ribonuclease H-like 673 998 IPR012337 -
Lele53g0785 1037 SMART Piwi_a_2 688 998 IPR003165 GO:0003676
Lele53g0785 1037 Pfam Piwi domain 689 995 IPR003165 GO:0003676
Lele53g0785 1037 FunFam protein argonaute 10-like 757 1037 - -
Lele53g0785 1037 Pfam PAZ domain 422 525 IPR003100 GO:0005515
Lele53g0785 1037 MobiDBLite consensus disorder prediction 89 114 - -
Lele53g0785 1037 CDD Piwi_ago-like 558 997 IPR045246 -
Lele53g0785 1037 SMART PAZ_2_a_3 404 540 IPR003100 GO:0005515
Lele53g0785 1037 SMART DUF1785_2 340 392 IPR014811 -
Lele53g0785 1037 FunFam Argonaute 10 574 750 - -
Lele53g0785 1037 FunFam Protein argonaute 7 387 513 - -
Lele53g0785 1037 Pfam N-terminal domain of argonaute 185 331 IPR032474 -
Lele53g0785 1037 Pfam Argonaute linker 1 domain 341 390 IPR014811 -
Lele53g0785 1037 Gene3D paz domain 386 513 - -
Lele53g0785 1037 Gene3D - 574 750 - -
Lele53g0785 1037 ProSiteProfiles Piwi domain profile. 688 998 IPR003165 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0785 Lele-ChrLele53 17718731 17722437 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0785 179 1037 Eukaryotic Initiation Factors Gene Family AT1G48410 41.583 0.0 642