Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0780 ATGCCGTCGGATGGCGGCGCCGTCACTGGACTTAAACAGGATAGGCCTTCCGTTGAGCATCAGTCCCCGATGTTCATGCTTCCGGGGGGGCTTTTCCCAGCTTCTCAGGTCTCAGCTCAGGTCGTGCAGGTCAACGAGAATCCATCTTCGTCTTTATCGGCAGCTTCCATGGCTAAACAATCTCATCAGACACCACATTCTGGTACGACGACGTCGTCGTCAATGAAGGAATGTCCTGATGATGGATTCAACTGGCGCAAGTATGGTCAAAAACAGGTGAAAGGCAGTGAATTCCCTCGGAGTTATTACAAGTGCACGCATCCGAATTGCCCCGTGAAGAAGAAGGTGGAGAGATCTCTCGATGATGACCATGTTGTCGCCATCATTTACAAAGGACAACATAATCATCAAGCTCCTCGCCCCACCACCACCACCAACAACAAGAAGCACGCGAATGAGAACTCAAATAATGTACGAGGAACAACAACGTGGGAGTCATCAACAGGTGAACAACAAGAAGCAGAAGGATCAAGTGAGAGTGAGGAAGCTGCAGATAATGAAATGGAGGAGAAAAATACTGATGAGCCTGAGATAAAGAGGAGGAGGCAAGAAGGTATGGGGTCTGAGGGAGTAAGTTCGCATAGGGTAGCCATGGAACCAAGGATTATTGTGCAGACGACAAGTGAAGTTGACCTGCTTGACGATGGGTATCGATGGCGAAAATATGGCCAAAAAGTTGTCAAAGGCAACCCTTTCCCAAGCTACTACAAGTGCACGACCACGGGCTGCAATGTTAGGAAACACGTGGAGAGGGCATCCTCAGATCCTAAAGCTGTTATTACAACGTACGAAGGAAAACACAATCACGACGTGCCTGCTGCTAAACCTAACAGCCACACCATCGCCAACAATTCATCTGCATCATTACAGCTCAGAGCCCAAAGTTTCAATGGTGGACCTATTGGGCCCCACCAACAGCAACAACAACAGCCTGTTGCACGTCTTAGGCTCAAGGAAGAACGGATAACCTAG 1032 0.4893 MPSDGGAVTGLKQDRPSVEHQSPMFMLPGGLFPASQVSAQVVQVNENPSSSLSAASMAKQSHQTPHSGTTTSSSMKECPDDGFNWRKYGQKQVKGSEFPRSYYKCTHPNCPVKKKVERSLDDDHVVAIIYKGQHNHQAPRPTTTTNNKKHANENSNNVRGTTTWESSTGEQQEAEGSSESEEAADNEMEEKNTDEPEIKRRRQEGMGSEGVSSHRVAMEPRIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPFPSYYKCTTTGCNVRKHVERASSDPKAVITTYEGKHNHDVPAAKPNSHTIANNSSASLQLRAQSFNGGPIGPHQQQQQQPVARLRLKEERIT 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0780 343 MobiDBLite consensus disorder prediction 314 333 - -
Lele53g0780 343 MobiDBLite consensus disorder prediction 136 174 - -
Lele53g0780 343 MobiDBLite consensus disorder prediction 192 208 - -
Lele53g0780 343 Gene3D WRKY domain 59 140 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele53g0780 343 Gene3D WRKY domain 218 293 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele53g0780 343 SUPERFAMILY WRKY DNA-binding domain 78 139 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele53g0780 343 FunFam WRKY transcription factor 62 140 - -
Lele53g0780 343 Pfam WRKY DNA -binding domain 234 290 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele53g0780 343 Pfam WRKY DNA -binding domain 80 137 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele53g0780 343 MobiDBLite consensus disorder prediction 175 191 - -
Lele53g0780 343 ProSiteProfiles WRKY domain profile. 228 292 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele53g0780 343 SUPERFAMILY WRKY DNA-binding domain 225 292 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele53g0780 343 MobiDBLite consensus disorder prediction 43 78 - -
Lele53g0780 343 SMART WRKY_cls 79 138 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele53g0780 343 SMART WRKY_cls 233 291 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele53g0780 343 MobiDBLite consensus disorder prediction 1 24 - -
Lele53g0780 343 ProSiteProfiles WRKY domain profile. 74 139 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele53g0780 343 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 46 314 IPR044810 GO:0003700
Lele53g0780 343 MobiDBLite consensus disorder prediction 131 217 - -
Lele53g0780 343 FunFam WRKY transcription factor 57 219 292 - -
Lele53g0780 343 MobiDBLite consensus disorder prediction 314 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0780 Lele-ChrLele53 17681745 17683507 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0780 80 343 WRKY Transcription Factor Family AT2G03340 58.845 4.14e-100 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele53g0780 WRKY 1.1e-26 CL0274