Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0779 ATGTCGGACGAAGAACATCATTTCGAGTCCAAAGCCGATGCCGGAGCTTCAAAGACCTTCCCTCAGCAGGCCGGTGCTATCCGTAAGAACGGTTACATTGTGATTAAAAACAGGCCCTGCAAGGTTGTGGAGGTTTCAACTTCCAAAACTGGGAAGCATGGACATGCTAAGTGTCACTTTGTTGGAATTGACATTTTTACTGGGAAAAAGCTGGAAGATATCGTTCCTTCTTCACACAACTGTGATGTCCCACACGTCAACCGCACTGATTACCAGCTGATTGATATCTCAGAGGATGGATTTGTGAGTTTGCTGACTGACTCTGGTGGTACCAAGGATGATCTGAGGCTTCCCACTGATGAAGCTCTGCTTACACAGATCCAGGGTGGCTTTGCTGAGGGTAAAGATCTGGTTGTGAGTGTTATGTCTGCCATGGGTGAGGAGCAGATTTGTGCACTGAAGGATATTAAGTAA 474 0.4662 MSDEEHHFESKADAGASKTFPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDSGGTKDDLRLPTDEALLTQIQGGFAEGKDLVVSVMSAMGEEQICALKDIK 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0779 157 TIGRFAM eIF_5A: translation elongation factor IF5A 18 153 IPR001884 GO:0003723|GO:0003746|GO:0043022|GO:0045901
Lele53g0779 157 SMART eIF_5a_2 85 154 IPR020189 GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905
Lele53g0779 157 MobiDBLite consensus disorder prediction 1 20 - -
Lele53g0779 157 CDD S1_eIF5A 86 156 - -
Lele53g0779 157 PANTHER TRANSLATION INITIATION FACTOR 5A FAMILY MEMBER 1 156 IPR001884 GO:0003723|GO:0003746|GO:0043022|GO:0045901
Lele53g0779 157 Gene3D - 86 157 IPR012340 -
Lele53g0779 157 Pfam Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold 85 154 IPR020189 GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905
Lele53g0779 157 SUPERFAMILY Nucleic acid-binding proteins 86 156 IPR012340 -
Lele53g0779 157 FunFam Eukaryotic translation initiation factor 5A 1 85 - -
Lele53g0779 157 SUPERFAMILY Translation proteins SH3-like domain 15 93 IPR008991 -
Lele53g0779 157 ProSitePatterns Eukaryotic initiation factor 5A hypusine signature. 50 57 IPR019769 GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905
Lele53g0779 157 PIRSF Transl_init_eIF5A 1 157 IPR001884 GO:0003723|GO:0003746|GO:0043022|GO:0045901
Lele53g0779 157 FunFam Eukaryotic translation initiation factor 5A 86 157 - -
Lele53g0779 157 Gene3D - 1 85 IPR014722 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0779 Lele-ChrLele53 17677586 17679302 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0779 1 156 Eukaryotic Initiation Factors Gene Family AT1G13950 87.821 2.24e-100 283