Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0759 ATGATCATATCCCCAAGTGTTGTTGTGAAGGAAAAGGACGACGGAGCAGCCGAGCAGCTTAAAGCTGATGACTTTGTTGATAGTGAGTCATCTGGTGATGTGGCTGCTGATTTAGCAAAGGATAGCTTCTATATTGACAAGGCTGTCCGCCAGGCTAATGCCTCAATAAATACCTCATCTTTTGATGGTGATATACTCAGCTTCCCCAGTGATCACTGCTTTCCCGGTGTTATGGATTCCGATATATGTCGCTGGATTCTAGAGTTTCTCCTCAGGAGTTCCGTTCCAGATTCATTCATCAGGAAGGTTTGGAATGTTTTACCCCTCTCTGGCATCGATTCGCGGCTGTGGAAAACATTGGCTCTCAGGTCTATTCAGTCGGAGATGGCTACGACATCGTTTACAGAAAGCTCACTGGAATGTCTAGAGGTCATTGAAGAAATCGACAGGCTTGATGGCATTGCAATCACACAAGCCATGAAGGAGGCATATGGTGCTGTTGCCGTGGAGTGCAGTGTCACGTACCTGGACGCATGCCCAGATAAGAACACTCGCGGGTTGTATGACGATGCTGTCAATAAGATTTGGAGGGGCCGAGTTCGGCAAATGATGGAGGCGATGGCGTTAGGGAAGAGGAATCACTTATTCACGGCTGAGTTGATACGGTGGAAGGACATCATAGAGTCTGCACGCTGGGATGCAGAGGTGTGCGGGAGGTTAATGAACATGAATACCAAACAAAATGCCCTCGATAAGGTTAGGGTTTATCTAAAAGAAACTTGGGCATCCATGGGCCCTTCTTTTCTTGAGTTGGCAGCTACATTATCTGAAGACAAGGGTTGTGGAAGTTCAAGAGGGGATCAGATGGGTCACGCGGAGCTTCCTGCTAGTGTACCGAATGAAGTTTGTAACAAGGGTGCTTCTGAATCTGGGATGGTCTTTGATCAAACTAATGTGTGTAGAGGAAGGTTACATTGTTCCACTAACACGACTGAGGAGGGTTTAGTTGTGTCCGATGGAAGTGCATTGTATAATGCTGCAATCTGCATGGAGAAGGTGCCAGTGGCAGGTGAGAATCAAGATAGTGAGCAATTGGGAAGGAGAGTTGGGCCTTCTGTTGGTGGAAATCGGGCATTGGGTGGGGCTGAATTGCCTCAAAGGATAAATGGAGCAATTCAAAAGGGCAAGCTGCCACTTGAACATAATCATGTCCTATTAGGTGGGGTGGGCTACATGGATTACACAATTCCCTCTACACGTAGAGGAGTTAAAATTATTGATTCTGAGAGAGTGGTGCCAGTGACAGTTTGTGGCAAAGATCATAATGCATCTAGTATTCAAGTTCAAAAACTTCGGAAATCTCTCATGTCAAGTTCTTTGGAGTTGCGAGCATTGGTGAAGGATCCTCTTCCTGATGCATTGCATAAATCTGACACTGTAAGATCTGAATTAGCAACAAAGGGTGTGAATCACGAGCCTCCTTTTGAAAACCAGAGTACAGTTGTAAATGTACCAGAACAAAATACTTGCAGGAGCATGGTACTTTATCAACCTATCAATGATATTGTAAAGAAACAGTCTTCTGCTAATTGCAATAATGTTCACCGTCCCAGCTTGATGGAACGAAGTAGTACTGCCCATACTTATGAGTGGGATGATCCATTTAATGGCTTGCCTGGGGGAAGCCCTAATAAAAGGAGGAGAAAGACCAGATGGAGTTCTGAAGAAGAGGATGCATTAAGGGCTGGTGTAAAGAAGTTTGGAAAAGGAAACTGGAAGCCAATCCTAAGATTTTACAGTGAGGTATTTGCAAAGACAGGGAGAACAGAAGTTGATTTGAAGGATAAATGGAGAAATTTGACACGGTAG 1869 0.4494 MIISPSVVVKEKDDGAAEQLKADDFVDSESSGDVAADLAKDSFYIDKAVRQANASINTSSFDGDILSFPSDHCFPGVMDSDICRWILEFLLRSSVPDSFIRKVWNVLPLSGIDSRLWKTLALRSIQSEMATTSFTESSLECLEVIEEIDRLDGIAITQAMKEAYGAVAVECSVTYLDACPDKNTRGLYDDAVNKIWRGRVRQMMEAMALGKRNHLFTAELIRWKDIIESARWDAEVCGRLMNMNTKQNALDKVRVYLKETWASMGPSFLELAATLSEDKGCGSSRGDQMGHAELPASVPNEVCNKGASESGMVFDQTNVCRGRLHCSTNTTEEGLVVSDGSALYNAAICMEKVPVAGENQDSEQLGRRVGPSVGGNRALGGAELPQRINGAIQKGKLPLEHNHVLLGGVGYMDYTIPSTRRGVKIIDSERVVPVTVCGKDHNASSIQVQKLRKSLMSSSLELRALVKDPLPDALHKSDTVRSELATKGVNHEPPFENQSTVVNVPEQNTCRSMVLYQPINDIVKKQSSANCNNVHRPSLMERSSTAHTYEWDDPFNGLPGGSPNKRRRKTRWSSEEEDALRAGVKKFGKGNWKPILRFYSEVFAKTGRTEVDLKDKWRNLTR 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0759 622 CDD SANT_TRF 571 622 - -
Lele53g0759 622 PANTHER MYB TRANSCRIPTION FACTOR 78 622 - -
Lele53g0759 622 ProSiteProfiles Myb-like domain profile. 564 621 IPR001005 -
Lele53g0759 622 Gene3D - 562 622 - -
Lele53g0759 622 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 564 622 IPR017930 -
Lele53g0759 622 SMART sant 568 622 IPR001005 -
Lele53g0759 622 MobiDBLite consensus disorder prediction 551 573 - -
Lele53g0759 622 Pfam Myb-like DNA-binding domain 570 620 IPR001005 -
Lele53g0759 622 SUPERFAMILY Homeodomain-like 566 621 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0759 Lele-ChrLele53 17554533 17565487 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0759 572 620 Single Myb Histone (SMH) Gene Family AT1G15720 63.265 7.68e-09 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele53g0759 Myb_DNA-binding 8.9e-09 CL0123