Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0749 ATGCTTGCTCTTGCTATTGCCCTCCCTTCCGTTGCGATGCCGATGATCACGCCGACGAGACGACCGCCTCTTCCGACACGCTTCGCAGTTGTGGCTCATGGATTCCCTTCCTTTCTCCCCAAGCAAGTCCAACAAATCAAAGATCCTTTCGCTCAGAACTTCGCTCTCAGGATCCAGCGACTTCCCGTTCCGGTTAACTTCTCAGAAAATCCCATCATGAGTAGTTGCGTGAAGCCAGTGATGCAGAACAAAGCAAATCCAATAGTTCTTCTGCATAGTTTTGACAGCTCATGTTTAGAATGGAGATATGCATATCCATTGATTGAAGAAGCTGGTTTTGAGGCCTGGGCCATTGACATTCTTGGTTGGGGTTTCTCTGATTTAGAAAATCTTCCATTATGTGATGTGGCATCCAAGCGCCATCATTTCTATCAGTTTTGGAAGTCCTACATCAGAAGGCCAATGATATTGGTAGGACCAAGCCTTGGTTCTGCTGTTGCCATTGACTTTGTCACCAATCATCCAGACGCTGTGGAAAAGCTTGTTTTGATTGGTTCCAGTGTATATGCAAAGGGAACAGGACTGCTATCAACTTTACCCAGAGCGGCAGCTTATGCTGGGGTATACCTATTGAAGAGCATCCCTTCGCGCTTATATGCGACCTATTTGATCTTCTCTGACGTATCATTTAGTACCAGTCTCGACTTGGCTAGTGTGGGTCGCTTGCATTGCTTATTGCCTTGGTGGGAGGATGCTACAGTGGATTTCATGGCTAGTGGCGGTTATAATGTTGCTTCTATGATAAAAGAGGTAAAGCACAAAACTCTCATCATTTGGGGTGAGAATGATCGCATAATCAGCAATAAGTTTGCAGTGCGACTGCATTCTGAGTTGCCTGATGCAATATTACGCCAAATACCAAATTGTGGCCATCTCCCTCATCTGGAAAGGCCTGGTTCAGCTGTCAAATTGATTCTTGAGTTTGTTCAGAAGAGAGAAACCAACATAGTAAATCACTGTCGGGATAGCAAAATTTACAGATTGGGCTTAAGCGGCACGGCTTTGCTAGAGTCACCGAAGCCAGTTGAACCAGTGCCAGTAGTTGTGGTGGACGTGGGGCTTATCCCAAACGTAGGGCTTGATGTTCCAGTTCCTGTCCCTGTGGTTGTCCCTGTAGTTGTGGGTGTGGTTGGGGTTGTAGTCGAAGGTGTTGTTCCTGTTATTCCCGTTGTCGGCGATGTTGATGGAGTTGTCGGCGTGCCTGTTCCTGTACTACTGTAA 1281 0.4668 MLALAIALPSVAMPMITPTRRPPLPTRFAVVAHGFPSFLPKQVQQIKDPFAQNFALRIQRLPVPVNFSENPIMSSCVKPVMQNKANPIVLLHSFDSSCLEWRYAYPLIEEAGFEAWAIDILGWGFSDLENLPLCDVASKRHHFYQFWKSYIRRPMILVGPSLGSAVAIDFVTNHPDAVEKLVLIGSSVYAKGTGLLSTLPRAAAYAGVYLLKSIPSRLYATYLIFSDVSFSTSLDLASVGRLHCLLPWWEDATVDFMASGGYNVASMIKEVKHKTLIIWGENDRIISNKFAVRLHSELPDAILRQIPNCGHLPHLERPGSAVKLILEFVQKRETNIVNHCRDSKIYRLGLSGTALLESPKPVEPVPVVVVDVGLIPNVGLDVPVPVPVVVPVVVGVVGVVVEGVVPVIPVVGDVDGVVGVPVPVLL 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0749 426 Pfam Alpha/beta hydrolase family 88 321 IPR000073 -
Lele53g0749 426 SUPERFAMILY alpha/beta-Hydrolases 85 330 IPR029058 -
Lele53g0749 426 PANTHER HYDROLASE 33 332 - -
Lele53g0749 426 PRINTS Epoxide hydrolase signature 171 184 IPR000639 GO:0003824
Lele53g0749 426 PRINTS Epoxide hydrolase signature 306 328 IPR000639 GO:0003824
Lele53g0749 426 PRINTS Epoxide hydrolase signature 112 127 IPR000639 GO:0003824
Lele53g0749 426 PRINTS Epoxide hydrolase signature 92 110 IPR000639 GO:0003824
Lele53g0749 426 PRINTS Alpha/beta hydrolase fold signature 171 184 IPR000073 -
Lele53g0749 426 PRINTS Alpha/beta hydrolase fold signature 112 127 IPR000073 -
Lele53g0749 426 PRINTS Alpha/beta hydrolase fold signature 157 170 IPR000073 -
Lele53g0749 426 PRINTS Alpha/beta hydrolase fold signature 275 289 IPR000073 -
Lele53g0749 426 Gene3D alpha/beta hydrolase 78 341 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0749 Lele-ChrLele53 17481583 17489792 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0749 87 329 Acyl Lipid Metabolism Gene Families AT3G10840 23.810 2.36e-08 53.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0749 53 17481583 17489792 Lele55g0740 55 4949443 4953912 hybridization
Lele53g0749 53 17481583 17489792 Lele56g0693 56 5184976 5188108 hybridization