Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0741 ATGGAAGAAGCACATGGCTTTTCTATGTCCATTCCTCCTGAATTGGCCTTGTCTCATGACAGTGGTCAGAGGTCTATTTTCAATGGCCGTGTGAAGAAGAGAGGTCATGCAAGTCGTTCTTGGATAAAAATTGATCAGGATGGGAATTCACAGGTTGTGACTCTTGACAAGCCTTCTATTATGAGACATTGTTCTTTACCTTCGAGAGATCTCAGACTATTGGATCCTATGTTCATTTATCCTTCTAGCATATTAGGACGGGAAAAGGCAATTGTAGTCAACCTTGAGCAAATCCGGTGTATAATTACTGCTGATGAGGTTTTCTTGATGAACTCCTTGGATGGCAGCGTTAGCCAATACATGTCAGAATTATGCAATCGACTTCAGAAAGAAAAATCTGATGATCTTCCTTTTGAATTTTGGGCACTGGAGCTGGCTTTGGAATTGACATGCATATTTTTAGATGCTCAGGTCAATGAACTGGAAATGGAAGTATATCCAGTGTTAGATGAACTGGCCTCGTCAATCAGTACTCACAATCTAGAACATGTTCGAAGATTTAAAGGTCATCTACTTTCATTGACTCAGCGAGTTCAAAAGGTTCATGATGAAATTGAGCAACTCATGGATGATGATGGTGACATGGCTGAAATGTGCCTGAGCGAGAAGAAGAGAAGATTAGATCCTCACTCTTCAAATGACCTCGGTCTTCCAACTCACAGCTCTGGTAGAGTTAAAGGGATTTCAAAATCAGCTCCTACTTCACCAGATAGGTCCATTAGTGGGGTCCATATGTTACAAAGGGCTTTGACCAACGTTGGAAATTCGAGTAAACATGAGAGTCTGACGAGTTCTCATGTTGCGGAAAAGATTGAGCCACTGGAAATGTTACTCGAAGCGTACTTTGTCGTCATTGATAATACTCTTACCAAGTCATTGTCGCTCAAAGAATATATAGACGACACAGAAGATTTTATCAACATAAAATTGGGAAATATTCAGAACCAACTCATACAATTTCAGTTGCTTCTTACAGCGGCAACATTGATAGCTACAATATTTGCTACTGTGACCGCAGTTTTTGGAATGAACTTTGAAACCTCAGTTTTTGATGATCCATGTGGATTCAATTTGGTTGTGATAATTTCAGGAGTTGCTAGTGCGGTTTTGTACTTCTTCTTTATAGTCTGTTTTAGGTGCAGGAAACTTCTTCCAGCATAA 1221 0.3997 MEEAHGFSMSIPPELALSHDSGQRSIFNGRVKKRGHASRSWIKIDQDGNSQVVTLDKPSIMRHCSLPSRDLRLLDPMFIYPSSILGREKAIVVNLEQIRCIITADEVFLMNSLDGSVSQYMSELCNRLQKEKSDDLPFEFWALELALELTCIFLDAQVNELEMEVYPVLDELASSISTHNLEHVRRFKGHLLSLTQRVQKVHDEIEQLMDDDGDMAEMCLSEKKRRLDPHSSNDLGLPTHSSGRVKGISKSAPTSPDRSISGVHMLQRALTNVGNSSKHESLTSSHVAEKIEPLEMLLEAYFVVIDNTLTKSLSLKEYIDDTEDFINIKLGNIQNQLIQFQLLLTAATLIATIFATVTAVFGMNFETSVFDDPCGFNLVVIISGVASAVLYFFFIVCFRCRKLLPA 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0741 406 Coils Coil 191 211 - -
Lele53g0741 406 Gene3D Magnesium transport protein CorA, transmembrane region 113 337 - -
Lele53g0741 406 MobiDBLite consensus disorder prediction 226 259 - -
Lele53g0741 406 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 28 404 IPR039204 -
Lele53g0741 406 CDD Mrs2_Mfm1p-like 41 403 IPR039204 -
Lele53g0741 406 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 342 395 IPR045863 -
Lele53g0741 406 Gene3D - 26 112 - -
Lele53g0741 406 MobiDBLite consensus disorder prediction 234 259 - -
Lele53g0741 406 FunFam Magnesium transporter MRS2-1 29 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0741 Lele-ChrLele53 17435474 17438300 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0741 2 405 MRS2 Gene Family AT2G03620 62.559 3.51e-168 476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0741 53 17435474 17438300 Lele55g0750 55 5010603 5013437 hybridization