Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0735 ATGATTGTGTCAGCAGAAGAGGCTGCTGAAGAGTACGAGTTTCTAATCAGACAGACAGGAAAAAATCTCATAGTGAGTGTATCTGACACAAGTGACTGCCCCAAATTTCATTTATTCCTTCTTGAATTGGGTGTGGACGGCCATGTTGCCTATCTATTTCCTAATCACTCAGCTCTAAAAGAGAAGGAACAATGGGTGACTTTCACTACTGATTCCTCCAAACCCTCTCATGACAGAATCACATTCACTTTACCTGTTACCAATACTGCATCCAACATTGCAGCGACCGCCACAGGTGATAGTAAAGCAGACGCTGTACACTTGGCGGCTGGTAAACCGGGGCCCGAGTGCCCCGTGGTGCCAGAGAGGATGGTCCGGCCGGAGAAGTCTAGGTTAGTTTGGTTTTTGGATAAGCCAGCTGCTTCAAAACTTAAAACCTTCCCTGATGTCCAATCAGTATGA 462 0.4632 MIVSAEEAAEEYEFLIRQTGKNLIVSVSDTSDCPKFHLFLLELGVDGHVAYLFPNHSALKEKEQWVTFTTDSSKPSHDRITFTLPVTNTASNIAATATGDSKADAVHLAAGKPGPECPVVPERMVRPEKSRLVWFLDKPAASKLKTFPDVQSV 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0735 153 SUPERFAMILY NagB/RpiA/CoA transferase-like 4 145 IPR037171 -
Lele53g0735 153 Pfam Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 5 134 IPR006148 GO:0005975
Lele53g0735 153 Gene3D - 2 147 - -
Lele53g0735 153 PANTHER 6-PHOSPHOGLUCONOLACTONASE 4 145 IPR039104 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0735 Lele-ChrLele53 17391095 17391556 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0735 53 17391095 17391556 Lele55g0756 55 5051745 5052206 hybridization
Lele53g0735 53 17391095 17391556 Lele56g0701 56 5250422 5253750 hybridization