Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0732 ATGTTTCGATGCCCAGCTCGAGGCTCCTTCTGCATCTCTTCTTCTTCTTCTTCTTCTTGTTCGTTTTGTATCATTCTCTTCCACTCCATTTTTCTCCATGGCATAGCATTCTCTGCTAATCATGAAGCATCTCTTCTCTTCTCTTGGCTTCATAGCTCTGCTTCGCCGCCACCTCCATCTTTCTCCAACTGGAACATCCTTGACGCCAACCCATGCAATTGGACCTTCTTAACATGTTCTTCACAAGGTTCCATCCCTCCAAGTATAGGTAAGCCTCAGAACTTGGAGAGCTTGTCTCTGAACAGTAACCAGCTTTCAGGAAAAATCCCAGTTGAGCTAGGGAACTGCATTAGCCTTAAAAGTATCCTCCTTTTTGATAACCAGCTATGTGGTGTTATCCCACATGAGATAGGGAAGTTGTCAAAGCTTGAGATTCTTAGAGCAGGAGGAAACAAAGATTTAGAAGGGGAAATCCCTGAAGAAATTGGAGAATGCAGTAATTTGAGGGAACTGGGGCTTGCTGATACTGCAGAGTTAGGTAACTGCTCTGAACTTGTTGATTTATTCCTATATGAAAATAGTCTATCTGGGTCTATTCCACCTGACGTGGGCAAGCTTCAGAAGCTGGAGCAATTGTTTTTATGGCAGAATAGTCTTGTGGGAGCTATCCCAGAAGAGATTGGAAACTGTACAAGCTTGAAAAGAATTGATCTTTCTTTGAATTCTCTATCTGGCACTATTCCTTTATTTTTTGGGGGTCTTTTAGAACTTGAGGAGTTCATGATCAGTGATAATAATGTGTCTGGGTCAATACCTGCAAGTCTTTCAAATGCCTCGTGTCTGCAACAGTTGCAAGTTGACACAAATCAGCTCTCAGGTTTGATTCCCCCAGAGCTTGGGAAGTTATCAAAGCTCACAGTTTTCTTTGCTTGGCAAAACCAACTTGAAGGAAGTATTCCTTCTACTCTGGCAAATTGTAGTAACCTAAGAGCACTAGATTTGTCTCACAATGAACTTACTGGTAGCATTCCTCCTGGGCTATTTCAACTTCAGAACCTTTCAAAATTGCTCTTGATTTCTAATGATATTTCAGGTTCAATCCCATCAGAAATAGGAAGTTGTAGTTCTCTTATAAGACTGAGGCTTGGGAAGAATAGGATTACTGGTGGGATCCCTAAGTCAATAGGGAATCTCATAAACCTGAACTTTTTAGACCTCAATGAGAATCACCTTTTTGGGCAAGTCCCAGATGAGATCGGCAACTGCACAGAACTGCAAATGATAGGCTTCAGCAACAACAACTTAGAAGGTCCACTGCCTAATTCACTGTCATCACTATCTTTGCTCCAAGTATTTGATGGATCTTCTAACAGATTTTCAGGCCAAATAGCAGAAAGTTTGGGCCATCTTGTTTCACTGAATAAACTAATCCTGGGTAGAAATTTGCTTTCTGGGCAAATTCCTGAATCATTGAGCCAATGTTCAAGTCTTCAAATGCTTGATCTTAGTAGCAATGAGCTCACAGGAAACATTCCTCCAGAGCTGGAGGGAAGTTTCAACTCACTTGCAGGGCTAGATAATCTTGTCTCTCTCAATATTTACTACAACAAGTTCGCAGGTTATCTACCAGATAATAAGCTTTTTAGGCAATTATCTGCAAAGGACCTAACTGGGAATGAAGGTCTCTGCTCATCTGGTCAGTACTCATGCTTTGTGAGTGCTTCAAGCATGGCGCTGAACGGAAGTGAAGAGAGGAAGTCGCGAAGGATTAAGCTAGCTATTGGTTTGCTAGTAGTCTTAACAGTACTACTGACAATAATGTGGATAATTGCAGTGATACAGGCAAGAAAAACCATTAGAAATGATGATTCAGAACTACGGGACTCATGGACATTGAGACGTTTAGTTGAAGGAAATATAATTGGAAAAGGATATTCTGGCATTGTTTACCGCGCTGAAATGGAGATGATCACGGAGAAGAGCGATGTATATAGCCATGGAGTAGTTATGTTGGAAGTCTTGACGGGCAAGCAACCGATAGATCCGATGATACCGGAGGGCCAACATGTTGTAGATTGGGTGAGACAGAAACGAGGGGTTGAAGTGCTTGATTCAAGCTTAATTTCAAGACCAGAATCAGAAATAGAGGAAATGATGCAAGCACTAGGCATAGCCTTGTTGTGTGTGAACTCACCCCCAGATGAGAGACCAACAATGAAAGATGTTGCAGCAATGCTTAAAGAGATCAAACAAGAAAGAGAAGAATATGCAAAAGTTGGTGCACTTTTGAAGGGATCTCTGCAAATGATCATCATGTCCAAGCAACATCTTCATCACTGCCAGTGCAAGCAGTGCAGAATTTGTACCCAGAAGGCAATAATAATAATACGATCTTCTCTGTATCTTCACTGCTTCATCCATCTTCTTCTTCCAGTGCCAAAGTTGGTTTGA 2451 0.4162 MFRCPARGSFCISSSSSSSCSFCIILFHSIFLHGIAFSANHEASLLFSWLHSSASPPPPSFSNWNILDANPCNWTFLTCSSQGSIPPSIGKPQNLESLSLNSNQLSGKIPVELGNCISLKSILLFDNQLCGVIPHEIGKLSKLEILRAGGNKDLEGEIPEEIGECSNLRELGLADTAELGNCSELVDLFLYENSLSGSIPPDVGKLQKLEQLFLWQNSLVGAIPEEIGNCTSLKRIDLSLNSLSGTIPLFFGGLLELEEFMISDNNVSGSIPASLSNASCLQQLQVDTNQLSGLIPPELGKLSKLTVFFAWQNQLEGSIPSTLANCSNLRALDLSHNELTGSIPPGLFQLQNLSKLLLISNDISGSIPSEIGSCSSLIRLRLGKNRITGGIPKSIGNLINLNFLDLNENHLFGQVPDEIGNCTELQMIGFSNNNLEGPLPNSLSSLSLLQVFDGSSNRFSGQIAESLGHLVSLNKLILGRNLLSGQIPESLSQCSSLQMLDLSSNELTGNIPPELEGSFNSLAGLDNLVSLNIYYNKFAGYLPDNKLFRQLSAKDLTGNEGLCSSGQYSCFVSASSMALNGSEERKSRRIKLAIGLLVVLTVLLTIMWIIAVIQARKTIRNDDSELRDSWTLRRLVEGNIIGKGYSGIVYRAEMEMITEKSDVYSHGVVMLEVLTGKQPIDPMIPEGQHVVDWVRQKRGVEVLDSSLISRPESEIEEMMQALGIALLCVNSPPDERPTMKDVAAMLKEIKQEREEYAKVGALLKGSLQMIIMSKQHLHHCQCKQCRICTQKAIIIIRSSLYLHCFIHLLLPVPKLV 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0732 816 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 347 573 - -
Lele53g0732 816 Gene3D Ribonuclease Inhibitor 439 570 IPR032675 -
Lele53g0732 816 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 176 344 - -
Lele53g0732 816 ProSiteProfiles Leucine-rich repeat profile. 328 350 IPR001611 GO:0005515
Lele53g0732 816 SMART LRR_typ_2 206 230 IPR003591 -
Lele53g0732 816 SMART LRR_typ_2 326 350 IPR003591 -
Lele53g0732 816 SMART LRR_typ_2 93 116 IPR003591 -
Lele53g0732 816 SMART LRR_typ_2 470 494 IPR003591 -
Lele53g0732 816 SMART LRR_typ_2 398 422 IPR003591 -
Lele53g0732 816 SMART LRR_typ_2 495 518 IPR003591 -
Lele53g0732 816 Coils Coil 739 759 - -
Lele53g0732 816 Gene3D Transferase(Phosphotransferase) domain 1 644 764 - -
Lele53g0732 816 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 86 175 - -
Lele53g0732 816 Gene3D Ribonuclease Inhibitor 342 438 IPR032675 -
Lele53g0732 816 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Lele53g0732 816 Gene3D Ribonuclease Inhibitor 38 176 IPR032675 -
Lele53g0732 816 Gene3D Ribonuclease Inhibitor 247 341 IPR032675 -
Lele53g0732 816 Gene3D Ribonuclease Inhibitor 177 246 IPR032675 -
Lele53g0732 816 PRINTS Leucine-rich repeat signature 329 342 - -
Lele53g0732 816 PRINTS Leucine-rich repeat signature 494 507 - -
Lele53g0732 816 Pfam Protein tyrosine and serine/threonine kinase 655 745 IPR001245 GO:0004672|GO:0006468
Lele53g0732 816 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 656 747 - -
Lele53g0732 816 SUPERFAMILY L domain-like 125 559 - -
Lele53g0732 816 SUPERFAMILY L domain-like 45 175 - -
Lele53g0732 816 SUPERFAMILY Protein kinase-like (PK-like) 656 753 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0732 Lele-ChrLele53 17373134 17377209 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0732 651 751 Receptor kinase-like Gene Family AT5G56040 52.830 1.18e-27 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele53g0732 PK_Tyr_Ser-Thr 7e-07 CL0016