Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0724 ATGGAACTCGAACCGAACAACCCCGCAAACTTTGTCGTGCTTTCCAACATATATAAGGATCTTGGAAGATGGCAAGATGTTGCTCGATTGAAGGTTGCACTAAGAGATACCGGTTTCAGGAAATTGCCAGGATGTAGTGTGATTGAGGTCAGTGATAATGTGGTGGAATTTTATTCCTTAGATGAGAGACATCCTGAGACAGAGGATATATACAGGACGTCATTTGGATCTTCCCCCTTTAAGGAGTCAAACAGGAAGTTAGCTAGTTGCTTTCGTGTTCTTCCTTTTTCTTCCTTTACTATTCTGAACAAAGTTCTCCATTTGAACGAAGCCTATGAGACTAAAATGTCATTCTCAGAACATGTCACAATCCAGGCAAAAGATGCAGAAAATATAATTACTAAGCTCGGAGTGAAGGATACTGCTACTGCAACAAGAGTTAAAGCTGCAAATGAGGTGATTGATGAAATGGGCAAGATAGGAACAAAGTTGCCAGGCTTCTGTCTCAACAGAATCCGCCCTCATGCTCGTGTCCGTTCCCCGCCTGTACAACCCAAGCTTGATCCCAGTGCCGTCAAAACCGACCTCAAAGCCGAGAATCCCGGCGATGATTGCGAGAAGAAACCTGGCGACGGCACGAAGAACGGGGTTGTTGTTGGTAGGAAAATCATGATTGTGGTTGATTCTAGTTTTGCAGCCAAGGGGGCTGTGCAATGGGCACTCACTCACACTGTTCAGAGCCAGGACATGATCATACTTCTTCATGTCACTAAGCCTTCTAAACAAGCCACAGATGAAGATTCCAGCAAGGAGATTACTACTCCAAATCCAAGGGCTTATGAACTTGTCTCCTCCTTCAAGAATATGTGCCACGTCAAGAGACCTGAAGTACAAATTGAGATTGCAATAGTGGAAGGGAAGGAAAAGGGACCAAAAATAGTGGAGGAAGCAAGAAAAGAAGGTGTGTCACTTCTGGTTTTAGGGCAGAAGAAGAGGTCGACGACGTGGCGGCTTCTGATGATGTGGGCGGGCCACCGGGTGGCGGGCGGCATGGTGGAGTATTGCATACAGAATGCTCATTGTATGGCAATTGCAGTGAGAAGAAAAGGCAAGAAATCAGGAGGATATATGATCACCACAAAGCGTCACAAAGATTTTTGGCTCCTAGCTTAA 1173 0.4535 MELEPNNPANFVVLSNIYKDLGRWQDVARLKVALRDTGFRKLPGCSVIEVSDNVVEFYSLDERHPETEDIYRTSFGSSPFKESNRKLASCFRVLPFSSFTILNKVLHLNEAYETKMSFSEHVTIQAKDAENIITKLGVKDTATATRVKAANEVIDEMGKIGTKLPGFCLNRIRPHARVRSPPVQPKLDPSAVKTDLKAENPGDDCEKKPGDGTKNGVVVGRKIMIVVDSSFAAKGAVQWALTHTVQSQDMIILLHVTKPSKQATDEDSSKEITTPNPRAYELVSSFKNMCHVKRPEVQIEIAIVEGKEKGPKIVEEARKEGVSLLVLGQKKRSTTWRLLMMWAGHRVAGGMVEYCIQNAHCMAIAVRRKGKKSGGYMITTKRHKDFWLLA 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0724 390 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 157 390 - -
Lele53g0724 390 MobiDBLite consensus disorder prediction 197 211 - -
Lele53g0724 390 Pfam Universal stress protein family 221 367 IPR006016 -
Lele53g0724 390 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 221 371 - -
Lele53g0724 390 Gene3D HUPs 220 375 IPR014729 -
Lele53g0724 390 MobiDBLite consensus disorder prediction 179 213 - -
Lele53g0724 390 CDD USP_Like 222 366 - -
Lele53g0724 390 Pfam E motif 1 49 IPR046848 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0724 Lele-ChrLele53 17312107 17317459 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0724 1 71 Glycoside Hydrolase AT3G49170 39.437 9.03e-12 65.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0724 53 17312107 17317459 Lele55g0766 55 5125108 5126332 hybridization
Lele53g0724 53 17312107 17317459 Lele56g0710 56 5332061 5333282 hybridization