Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0720 ATGTTTGCACAAAACAGCACTGATGATTTTGTGGATGATGATTTCTTTAAAAAATGTTGTGACGCCAAAACAGGAAGTGCTGCAGATATGATAACGATGGATGGCTGCAGAGCTTTTTTTTCGGAGGCTGACATGTCTGTTAGTTTTTCTCATTATTACGACGACTTTGACAATCTCTTCCGAAGATTGAACCCACCCAGGGTTGTAATTGATAACGAAGCCAGTGATAATGCCACTGTAATAATGGTTGATTATGCAAACAAACATGGAATACTCCTTGAAGTCGTTCAAATCCTCAATGATCTCAACCTTATCATAACCAAAGCTTACATATCTTCTGATGGAGGATGGTTCATGGATGTCTTCAATGTTACCGACCAAGATGGAAACAAAGTCACAGATGAAGCTGTTCTGAATTACATTCAACAGAATCTTGGACCAGATTCTTGCTGTATATCACCCGGGAGATCTGTTGGGGTTAATCAATCAATTGACAACACAACGATAGAATTATTGGGAACCGATAGGCCTGGATTAATCTCAGAAGTAAGTGCAGTTCTAACTCACCATAAGTGCAACATAGTTGATGCAGAGGTCTGGACACACAATGTTCGTGCGGCTGCAGTGATTCGCGTGACCGATGAAGAAACTCGCTCTGCTATTACTGACCCTTATAGGCTATCTCTGATCAAGGAGCTTCTGTGTAATTTGCTTGCTTCTTGTGATAACAAAAAGGGAAGGGCTAAGACTGTGGTCACTACTGATGAAGTCACCCATACTGATAGAAGGCTTCACCAGATGATGTGTTCTGATAGAGATTATGATAAAGATCCTTTCGATGATGATTTTGATGCGAGGCCCAGGCCAAGTGTGAATATTGTCCCTTGTTCTGAGAAAGACTACTCTGTAGTCACCATCTTATGTAAGGACAGGCCAAAGCTTGTGTTTGACACGATTTGTACTTTGACTGATATGGAATATGTTGTTTTCCATGGAAGTATTGATGCTCAAGGACCAGAAGCATATCAGGAATATTACATCAGACATGCTGATGGGTCCCCTGTAAAATCAGATGCAGAAAGTCAAAGATTGGTGCAATGTATTGAAGCTGCAATTGAGAGAAGAGTATCAGAGGGAGTGAAACTAGAACTCTGCACAGCTGATAGATTCGGGCTACTTTCAGATGTGACAAGGATATTGAGAGAGAACAGCCTCGATGTGACGAGAGCACAAGTGTCCACAAAGGATGGCAAAGCTGTAAACACATTCTACGTTCGTGGCGCATCTCGTTACCCTATTGATTCCAATTCCATAGAACCCATTTGCGAAATCATTGGCAGCAACATTCTCAAAGTAAAGGGAGTCCCTATTATACCCCCAGCAAATTCACAGAATCCCAGGTTCTTCTTTGGTGGCATTTTCAAGTCCAGATCCTTTGCAGACTTGGTCAAGTCTTATAGTTGA 1464 0.416 MFAQNSTDDFVDDDFFKKCCDAKTGSAADMITMDGCRAFFSEADMSVSFSHYYDDFDNLFRRLNPPRVVIDNEASDNATVIMVDYANKHGILLEVVQILNDLNLIITKAYISSDGGWFMDVFNVTDQDGNKVTDEAVLNYIQQNLGPDSCCISPGRSVGVNQSIDNTTIELLGTDRPGLISEVSAVLTHHKCNIVDAEVWTHNVRAAAVIRVTDEETRSAITDPYRLSLIKELLCNLLASCDNKKGRAKTVVTTDEVTHTDRRLHQMMCSDRDYDKDPFDDDFDARPRPSVNIVPCSEKDYSVVTILCKDRPKLVFDTICTLTDMEYVVFHGSIDAQGPEAYQEYYIRHADGSPVKSDAESQRLVQCIEAAIERRVSEGVKLELCTADRFGLLSDVTRILRENSLDVTRAQVSTKDGKAVNTFYVRGASRYPIDSNSIEPICEIIGSNILKVKGVPIIPPANSQNPRFFFGGIFKSRSFADLVKSYS 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0720 487 CDD ACT_ACR_1 78 147 - -
Lele53g0720 487 Pfam ACT domain 167 221 IPR002912 -
Lele53g0720 487 Pfam ACT domain 79 136 IPR002912 -
Lele53g0720 487 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 57 454 IPR040217 -
Lele53g0720 487 SUPERFAMILY ACT-like 377 444 IPR045865 -
Lele53g0720 487 CDD ACT_ACR_3 301 375 - -
Lele53g0720 487 Gene3D - 165 233 - -
Lele53g0720 487 ProSiteProfiles ACT domain profile. 381 460 IPR002912 -
Lele53g0720 487 ProSiteProfiles ACT domain profile. 168 249 IPR002912 -
Lele53g0720 487 SUPERFAMILY ACT-like 76 141 IPR045865 -
Lele53g0720 487 Gene3D - 379 455 - -
Lele53g0720 487 SUPERFAMILY ACT-like 166 234 IPR045865 -
Lele53g0720 487 ProSiteProfiles ACT domain profile. 80 160 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0720 Lele-ChrLele53 17283572 17291401 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0720 53 17283572 17291401 Lele55g0770 55 5150664 5152983 hybridization