Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0702 ATGCAAAAGCTTTGCCTTGTTAATGCAAAAATTAACATCTTCTCAAGTTTGAAAAGAGAATAGGAGAAGGAGAAGAAGCAGGAGGAGAAGGAAAAGGAAAAGAGAGCATTCATGACGATCGTTCATCAGAACACTCAGAAAGATTCAAGAAGAAAGAAGGTGCTTGTTGATGAGCAATTTCCTCTGCTAGTGAATGAGAAAGATGACGGTGGTTCTCAGGGGGCTTCTTTTAGTGGGTCAGTGTTCAATTTATCTACCACCATTATTGGAGCTGGAATTATGGCCTTACCTGCTGCCATGAAAGTTCTGGGATTGGGTTTGGGAATTATCGCCATAGTCTTTCTTGCGTTGCTCACGGAGACTTCCTTAGAGATTCTTATAAGGTTTAGCAGAGTTGGAAACGCTGAGACCTATGGGGAAGTAATGCGTTATGCCTTTGGAAGTGTTGGAAGATGGGCTTTTCAGATATGCGTTCTTCTTAACAATTTTGGTATTCTCGTCGTCTACATGATCATTATTGGTGATGTGCTATCTGGAACATCTTCAAGTGGAACTCATCATGCTGGTGTATTGGAAGGATGGTTTGGCGAATGCTGGTGGACTGGTCGTACTTTTATTCTCCTTGTAGCAACCCTATTTGTATTTGCTCCTTTGGCATTCTTCAAGCGGATACATTCTTTGAGATATTCTTCCGCTTTAGCAGTGGCACTGGCAATTGTATTTATAGTCATAACGGCAGGGATAACATTTATAAAATTGTTCAATGATAGCATTACCAGACCCAGGTTGCTTCCTAATGCTACTGATTTTACATCTGCATGGAAGCTGTTTACAGCAACCCCTGTTCTTGTGACAGCATTTGTCTGTCATTACAATGTGCATACAATAGACAATGAGCTAGAAGACTCTTCCATGATACAAAAAGTTGTACGTGCATCTCTGGTTCTATGTTCTAGTGTCTATATATTTACGGCATTATTCGGGTTTCTTTTGTTTGGTGAATCAACTCTTGATGATGTGCTGGCCAACTTTGATACTGACCTTGGCATCCCTTACAGCAGCCTGCTCAATGACATCGTTCGCCTCAGCTATGCCCTCCACCTTATGCTTGTTTTCCCAGTTATCTTCTTCTCACTGCGCTTCTACTTTGATGATTTGCTTTTCCCTTCAGCTAGATCAATGGATTTAGATAATGTTAGGTTTGTGTTAACCACAACTGGACTCATCTCTTTTATGTATGTGGCGGCAAATTTTATACCTAGCATTTGGGATACTTTCCAATTCACTGGAGCAACTGCTACTGTTTGCCTAGGGTTCATTTTTCCTGCCGCAATTGCTCTTAGGGATCCCAATGGCATTGCAACAAAGAAAGATAAGGTTTTATCTGTTGTCATGATTGTGCTGGCTGTGTCCTCTAATGTAGTTGCCATATACAGTAATGCCAATGCTATCTTTAGTAAACATGGTGATCCTCAGGAATGA 1482 0.4103 MQKLCLVNAKINIFSSLKREXEKEKKQEEKEKEKRAFMTIVHQNTQKDSRRKKVLVDEQFPLLVNEKDDGGSQGASFSGSVFNLSTTIIGAGIMALPAAMKVLGLGLGIIAIVFLALLTETSLEILIRFSRVGNAETYGEVMRYAFGSVGRWAFQICVLLNNFGILVVYMIIIGDVLSGTSSSGTHHAGVLEGWFGECWWTGRTFILLVATLFVFAPLAFFKRIHSLRYSSALAVALAIVFIVITAGITFIKLFNDSITRPRLLPNATDFTSAWKLFTATPVLVTAFVCHYNVHTIDNELEDSSMIQKVVRASLVLCSSVYIFTALFGFLLFGESTLDDVLANFDTDLGIPYSSLLNDIVRLSYALHLMLVFPVIFFSLRFYFDDLLFPSARSMDLDNVRFVLTTTGLISFMYVAANFIPSIWDTFQFTGATATVCLGFIFPAAIALRDPNGIATKKDKVLSVVMIVLAVSSNVVAIYSNANAIFSKHGDPQE 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0702 493 Coils Coil 11 20 - -
Lele53g0702 493 Pfam Transmembrane amino acid transporter protein 75 481 IPR013057 -
Lele53g0702 493 PANTHER AMINO ACID TRANSPORTER 69 471 - -
Lele53g0702 493 Coils Coil 22 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0702 Lele-ChrLele53 17156735 17161622 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0702 73 493 Amino Acid or Auxin Permease AAAP Family AT3G30390 65.321 0.0 565