Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0701 ATGAATTCAATAAAGTTGTTGAGTGAAAAGGCATTAGTGGAGGCTAGAGTACCAAAAGGAGCACAGAATCAGAAATTGTGGTTAGCTTTGGAAATGGTAGCTGCTAAAGTCCTCATTAAGTGCACTCTGATCTCTATGCAACCTGCTTCTTCCCTTGTAAATTGGCCTCATAGACTCCTCAACTTTTTAACCCCTCTTTTGGATGGATTCAGACTTCGACAAGTCGCCTCGTTCTTTCATTTTCAAGAGAACTGTGGTTTAGGGGCTTGTGCAGAATTCAATAGAAACGAGGATCATATTAGTTATTCATCTAGTATGCCCTCGGATTGGAGATTTGGGGTTCCTAATCTTGCAAATACATCAGTGGTTTTGGTGGATTCATATGTTCCAAGCTTCTGGGATCATCCCACCAGTTCCCAAAACTTGGGTTCGTGTGACATCAATGTGCAGAACAATGGTAGCTCCTCAAGCTCAATTGGAAATAGAAAAGATGGCCTTGCCTTAGCTGGTTATGATAGAACACTTGAAATGGGTTGGAACCCAACAACAAGTTCTATTTTAAAAGGGGATGCTGCTTTCTTACCAAACAGACCAACAATCTTTCCTCAGAGTTTGTCTCAGATTCCCACTGATTCTGCCTTTATTGAGAGAGCTGCAAGATACTCATGCTTCAGTCAGTTCAGTGGAGGGAATTTTGCTAGTATGGTGAACTCATTTGGGATTCCCGAATCCATGGTGGGTCTCAACGCTGGACGGGTTGTTCTTGCAGGCCATGGCTTAAAATCATCTCATGGAGCAAGATCTCAAGAAAGTGCTCAGGATGTTGTAGGTGAAGCTGCAAAAGACGTGTCTGTGTCTCCATCTTCTGTTCAGAATTTGGCCACTAAAGGAAGTAGCCCACTCAAGAATGACAAGAGAAGTGAAAGCCTAGTGACATCTCAAGATGAAGCAAAACAGACTCATGGCAGGTCTACTAATGAGTCTGATAGATCAGAATCAAGTGGTGATGATGATGCTGGCGGTCAAAATGATATGCCCATATTGGAGGGTACAGGCGAGGAGCCTTCTAACAAAGGACTAAACGCAAAGAAAAGGAAAAGAAGTGGACAGGATTCTGATAATGTAAAAGCCAACGGAGGTTCTGAACCACCAAGTGAAGCTGCAATGGAGAATTCTGAGAGCGGACAGAAGGGAGACCAACAACCAACTTCAACAACCAAGACTTTTGGGAAGAATACCAAACAGGGGTCTCAAGCTTCTGATCCACCAAAGGAGGAATACATACATGTTAGGGCTCGCAGGGGTCAAGCAACAAATAGCCATAGCCTTGCAGAGAGAGTAAGGAGGGAAAAGATCAGCGAAAGGATGAAATTTCTTCAAGACCTTGTACCTGGATGCAGCAAGGTGACTGGCAAGGCAGTTATGCTAGATGAAATCATTAACTATGTACAGTCACTTCAACGACAGGTTGAGTTTTTGTCCATGAAACTTGCAACTGTAAATTCACGGCTGGATTTTAATCTTGAAGGACTTATTGCCAAAGATATGCTTCAGCAACGGCCTGGCCCCTCATCTGCATTGAAGTTTTCTCCAGAAATGCCTATGGTTTTTCCTCCTTTACGTCCATCTCAACCAGGCCTTCTACAGACAAATCTTCCCGGCATAGCGAACTCATCTGATATACTTAGTAGAACCATTCATCAACAGTTAACTCCCGTGGTCGGAGGATTCAATGATCCTAATCAGCTACCTGAGATGTGGGAGGATGAACTGCACAATGTTGTAACCAACTGCTCCACCGAGTAG 1806 0.4363 MNSIKLLSEKALVEARVPKGAQNQKLWLALEMVAAKVLIKCTLISMQPASSLVNWPHRLLNFLTPLLDGFRLRQVASFFHFQENCGLGACAEFNRNEDHISYSSSMPSDWRFGVPNLANTSVVLVDSYVPSFWDHPTSSQNLGSCDINVQNNGSSSSSIGNRKDGLALAGYDRTLEMGWNPTTSSILKGDAAFLPNRPTIFPQSLSQIPTDSAFIERAARYSCFSQFSGGNFASMVNSFGIPESMVGLNAGRVVLAGHGLKSSHGARSQESAQDVVGEAAKDVSVSPSSVQNLATKGSSPLKNDKRSESLVTSQDEAKQTHGRSTNESDRSESSGDDDAGGQNDMPILEGTGEEPSNKGLNAKKRKRSGQDSDNVKANGGSEPPSEAAMENSESGQKGDQQPTSTTKTFGKNTKQGSQASDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNSRLDFNLEGLIAKDMLQQRPGPSSALKFSPEMPMVFPPLRPSQPGLLQTNLPGIANSSDILSRTIHQQLTPVVGGFNDPNQLPEMWEDELHNVVTNCSTE 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0701 601 MobiDBLite consensus disorder prediction 262 424 - -
Lele53g0701 601 MobiDBLite consensus disorder prediction 284 319 - -
Lele53g0701 601 MobiDBLite consensus disorder prediction 358 372 - -
Lele53g0701 601 CDD bHLH_AtBPE_like 426 511 - -
Lele53g0701 601 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 314 528 IPR024097 GO:0006355
Lele53g0701 601 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 434 505 IPR036638 GO:0046983
Lele53g0701 601 MobiDBLite consensus disorder prediction 320 337 - -
Lele53g0701 601 MobiDBLite consensus disorder prediction 373 420 - -
Lele53g0701 601 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 436 486 IPR011598 GO:0046983
Lele53g0701 601 FunFam Basic helix-loop-helix transcription factor 433 505 - -
Lele53g0701 601 Gene3D - 433 508 IPR036638 GO:0046983
Lele53g0701 601 Coils Coil 483 503 - -
Lele53g0701 601 Pfam Helix-loop-helix DNA-binding domain 439 487 IPR011598 GO:0046983
Lele53g0701 601 SMART finulus 442 492 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0701 Lele-ChrLele53 17152479 17155809 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0701 87 595 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68920 44.530 5.14e-109 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele53g0701 HLH 8e-06 No_clan