Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0693 ATGGCACAAGATACTTCTGCTGTTGATTCACATCACAGGTTCCCTGGTCTATTGAAAGATCAAGTTTGCTTGGTTAAAAGGAAAGACTCTGATCGCTATAAGATTGCTCCAATCCAAGATCAACTATCATTTGAGAAGGGTTTTTTTGTAGTCATCCGTGCATGCCAGTTGTTGTCCCAAAATAATGATGGAATAATATTGGTAGGGTTGGCTGGTCCTTCGGGGGCTGGGAAGACTGTATTCACTGACAAAATAGTCAATTTCATGCCCAGCATTGCAGTCATTTCGATGGACAATTACAATGATTCTAGTCGAATTATTGATGGAAATTTTGATGATCCACGCTTGACAGACTATGACACATTGCTCCAGAATCTACAAGATTTAAAGGCAGGAAAGTCAGCTCAGGTTCCAATCTATGATTTTAAGTCCAGTTCTCGTATAGGATACAGGACAGTCGAAGTCCCGAGCTCCAGAATTGTGATCATAGAGGGTATCTATGCCTTGAGTGAGAAGTTGCGACCTCTGCTGGACCTTCGTATATCTGTTACAGGTGGAGTTCATTTTGACCTGGTCAAGCGAGTTATACGAGACATTCAACGTGCTGGTCAACAACCTGCAGAAATCATTCATCAAATATCTGAGACGGTATTTCCAATGTACAAGGTCTTTATTGAGCAAGATCTGCAGACAGCACATATCAAAATAATCAACAAGTTCAATCCATTTACTGGGTTCCAGAGTCCTACTTACATATTGAAATCAGCAAGGAATGCGACAGTTGAACAAATTAAAGCTGTTTTCTCTGAAGATTTTAAGGAAACAAATGAGCAGATTTATGACATATATCTTCTACCGCCGGGTGAAGATCCAGAAACTTGCCAATCTTATTTACGGATGCGGAATAAGGAGGGCAAATACTGTCTAATGTTTGAGGAATGGGTCACAGATAGTCCATTTGTCATTTCACCAAGAATATCTTTCGAGGTTAGTGTACGGCTCCTTGGGGGCCTTATGGCCCTGGGATACACTATAGCTACCATTCTAAAAAGAAACAGCCATGTATTCTCTGATAATAGGGTGTCTGTGAAACTAGATTGGCTCGAGCAACTTAATCGACAATATGTTCAGGTGCAAGGAAAAGATCGTGCAATAGTAAGATGCATAGCCCAGCAGCTCGGCATGGAAGGTTCCTATATTGCTCGTACATACATCGAGCAAATACAACTGGAAAAGATTGTAGATGAAGTTATGGCCTTTCCAGATGATTTAAAAACAAAGCTTGGCCTAGATGAGGATATGGTGTCTAGCCCGAAAGAAGCACTCTCTAAAGCCTTTGCAGATAGGGCTCCTGTGAGAAAAACGCACAAAAGTGGTATGTCCCGGTCGTATACAAGCCAAAGGGACAAAAATCTACTCAAATATGGTGCCGGCAGCAAAGGTTTTGGTGAAAGAAATCCAGATTCCTCCATAGAGCTAACAAATGAGCTTTCAGAACAAATTTCTTCTCTCAATGATAGATTGGATGAGTTTACAAGTCGTATTGAAGAGCTGAATTCCAAGTTAAGCATCAATAAAAATTCTCCAACCCAACAAACCACAACACTCCAAGCTGAAGCCTGCAATGGTTCTGCTCCCACCTCTCACTTCATTACTAGTTTGGAAAGTGGTTCTCTAACTGGATCTATTATGAAGTCCTCATCTTCATTTCAATTAGCTAAGGAGACACCTTTAGTGGAAGAGATATTGGGTATTGCAAAAGGGCAGCGCCAGATCATGCAGAAAATAGAAAACCTCAATAGTCTTCTCCGTGGAATTGAAAACATGGGAGAAAGTTCTGGCCAAGCAAGATCCATCAGGACAAACATGGCTTCTGCTTCAGAATCCACTTCAGTCCGTGCCCTGCTTGCTCTCACTTTTGGTTTTGTTGGATTATTCTTGGTGAAGGGCTTGGTGTCTAGAACTTGA 1968 0.4141 MAQDTSAVDSHHRFPGLLKDQVCLVKRKDSDRYKIAPIQDQLSFEKGFFVVIRACQLLSQNNDGIILVGLAGPSGAGKTVFTDKIVNFMPSIAVISMDNYNDSSRIIDGNFDDPRLTDYDTLLQNLQDLKAGKSAQVPIYDFKSSSRIGYRTVEVPSSRIVIIEGIYALSEKLRPLLDLRISVTGGVHFDLVKRVIRDIQRAGQQPAEIIHQISETVFPMYKVFIEQDLQTAHIKIINKFNPFTGFQSPTYILKSARNATVEQIKAVFSEDFKETNEQIYDIYLLPPGEDPETCQSYLRMRNKEGKYCLMFEEWVTDSPFVISPRISFEVSVRLLGGLMALGYTIATILKRNSHVFSDNRVSVKLDWLEQLNRQYVQVQGKDRAIVRCIAQQLGMEGSYIARTYIEQIQLEKIVDEVMAFPDDLKTKLGLDEDMVSSPKEALSKAFADRAPVRKTHKSGMSRSYTSQRDKNLLKYGAGSKGFGERNPDSSIELTNELSEQISSLNDRLDEFTSRIEELNSKLSINKNSPTQQTTTLQAEACNGSAPTSHFITSLESGSLTGSIMKSSSSFQLAKETPLVEEILGIAKGQRQIMQKIENLNSLLRGIENMGESSGQARSIRTNMASASESTSVRALLALTFGFVGLFLVKGLVSRT 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0693 655 Coils Coil 494 521 - -
Lele53g0693 655 CDD UMPK_like 67 239 - -
Lele53g0693 655 PANTHER URIDINE KINASE 32 422 - -
Lele53g0693 655 PRINTS Uridine kinase signature 132 147 - -
Lele53g0693 655 PRINTS Uridine kinase signature 188 198 - -
Lele53g0693 655 PRINTS Uridine kinase signature 65 82 - -
Lele53g0693 655 ProSiteProfiles CYTH domain profile. 245 410 IPR023577 -
Lele53g0693 655 SUPERFAMILY CYTH-like phosphatases 264 407 IPR033469 -
Lele53g0693 655 Gene3D - 66 247 IPR027417 -
Lele53g0693 655 Gene3D - 252 413 - -
Lele53g0693 655 Pfam CYTH domain 269 404 IPR023577 -
Lele53g0693 655 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 53 236 IPR027417 -
Lele53g0693 655 Pfam Phosphoribulokinase / Uridine kinase family 68 236 IPR006083 GO:0005524|GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0693 Lele-ChrLele53 17051572 17059084 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0693 67 225 PRT Gene Family AT5G40870 27.976 6.80e-16 79.0