Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele53g0691 | ATGGATGTGGGGCGGCTGAATAATAACAGTCTCACTGGAGAAACCCCATCTTCTTTGGCTAATATGACCCAACTTGCTTTTCTGGATATTTCTTATAATAACTTGAGTGGACCTGTATCTACAATAAATGCAAAACCATTCAATATTGTAGGAAATCCCCAGATATGTGCAACTGGAACTGAGCAAAACTGCTTTAGAACCTCTGAACTTTCCTCTTCTTCTTCTTCCTTGAATATTTCTCAAGGCAAATTTTCTTTGATGTTAGTGGTAGCTACAAATAACTTAAGCAGCAAGAACTTGATTGGAAAAGGTGCATTTGGGAATGCGTACAAAGGGTTTCTCCCTGATGGTACAATTATAGCAGTGAAGAGGCTTAAAGATGGTAATGCCATTGGTCGTGAGATCCAATTCCAGACCAAAGTTGAGATGATTAGCTTAGCCGTGCACCGGAACCTCCTTGGCCTTTATGGATTCTGTATGACAGCTACTGAAAGGCTCTTGATTTATCCCTACATGTCCAATGGTAATGTTGCTTCCCGTCTTAAAGAAGGGCTTGCTATATTTGATGAGCAGTGTGATCCCAAGATAATTCACAGGGATGTGAAGGCTGCAAATATCTTGCTTGATGATTATTGTGAAGCTGTGGTAGGCAATTTCGGGTTAAAGAAACTTTTAGATCACCATGATTCTCATGTTACAAGAGCTGGTCGAGGCACTGTCGGGCACATAGCCCCAGAATATCTCTCAACAGGCCAGTGCTCTGAGAAAACAGATGTGTTTGGCTTTGGAATCCTCCTTCTTGAACTAATCTCAGGCCAGAGAGCTCTTGAATTCGGAAAAGCAGTGAACAACAAAGGAGCTGTTCTTGACTGGCTGAGCCAAATATTCTTGAAACAAAATCATGCATGA | 909 | 0.4147 | MDVGRLNNNSLTGETPSSLANMTQLAFLDISYNNLSGPVSTINAKPFNIVGNPQICATGTEQNCFRTSELSSSSSSLNISQGKFSLMLVVATNNLSSKNLIGKGAFGNAYKGFLPDGTIIAVKRLKDGNAIGREIQFQTKVEMISLAVHRNLLGLYGFCMTATERLLIYPYMSNGNVASRLKEGLAIFDEQCDPKIIHRDVKAANILLDDYCEAVVGNFGLKKLLDHHDSHVTRAGRGTVGHIAPEYLSTGQCSEKTDVFGFGILLLELISGQRALEFGKAVNNKGAVLDWLSQIFLKQNHA | 302 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele53g0691 | 302 | ProSitePatterns | Protein kinases ATP-binding region signature. | 101 | 123 | IPR017441 | GO:0005524 | |
| Lele53g0691 | 302 | ProSiteProfiles | Protein kinase domain profile. | 95 | 302 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Lele53g0691 | 302 | PANTHER | SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 | 4 | 282 | - | - | |
| Lele53g0691 | 302 | Pfam | Protein kinase domain | 97 | 277 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Lele53g0691 | 302 | SUPERFAMILY | Protein kinase-like (PK-like) | 71 | 278 | IPR011009 | - | |
| Lele53g0691 | 302 | SUPERFAMILY | L domain-like | 6 | 40 | - | - | |
| Lele53g0691 | 302 | Gene3D | Transferase(Phosphotransferase) domain 1 | 172 | 301 | - | - | |
| Lele53g0691 | 302 | Gene3D | Ribonuclease Inhibitor | 3 | 66 | IPR032675 | - | |
| Lele53g0691 | 302 | Gene3D | Phosphorylase Kinase; domain 1 | 68 | 171 | - | - | |
| Lele53g0691 | 302 | FunFam | Somatic embryogenesis receptor kinase 1 | 68 | 171 | - | - | |
| Lele53g0691 | 302 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 196 | 208 | IPR008271 | GO:0004672|GO:0006468 | |
| Lele53g0691 | 302 | SMART | serkin_6 | 95 | 302 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele53g0691 | Lele-ChrLele53 | 17041594 | 17045267 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele53g0691 | 5 | 293 | Receptor kinase-like Gene Family | AT2G23950 | 51.648 | 2.29e-116 | 343 |
Transcription factors information