Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0668 ATGGCTTCCTCTGCCTCTGCCTCTGCTGTCTTCCTCCTTTTCATGGCCAGAATTTTAGGGTTTACAGTGGCATTTCTTGTTCTGTTATGGGCCTCTGCCTTCTCCTCCAGCTTCCTCCCTTCCTCTCTCTCTCACCAACACCACCTTCTCTACTCTCTTCTTCATCCTCTGCTCATGGTAATTGGCTTCATTCTCATCAGCGGAGAAGCAATATTGGTTCACAGATGGTTTCCTGGTTCGAGAGGGTTGAAGAAATGTGTGCATTTGTGGCTGCAAGGGTTGGCTATGACTTGTGGATTCTTTGGCATTTGGACCAAATTTCAGGGGAAAGATGGCATTGTGGCAAATTTCTATAGCCTTCATTCTTGGATGGGTTTGCTTTGCATATCCCTCTTTGCTGCTCAGTGGTTGATAGGGTTCTGGAACTTCTGGCACAGAGGAGAAGTGAGGAAGGTGAGGAACAGAATACTACCTTGGCATGTGTTCCTTGGTCTCTACACATATGGTCTTGCTGTTGCCACAGCAGAAACTGGACTTGCAGAGAAGCTCATTTTCTTACAACAAGCTGCAACAACCAACTTATCCAAACACAGTGCAGAATCTATGGTGGTTAATAGCTTAGGTTTAGGCCTTGCCCTCTTAAGTGTTCTTGTTGTTTTTGCTGCTCTTTCACCAATTAAGAACCAACAATTACAGCAATCTCTCCAAACCAAATTTTCATTCTCTGATTCCTCCACCATCAAGAAGGGATTGCTTGTGCTTGTCTTTTTCTAATACTTCCGAGGTGGATGCCCTCACCCCACTGCTTCGTTTCGATTCGCGTTTCGTCAAACCCTTGTTCCCAAGTTACTCAGCACCATAGAAATGTGCTCTGCTACTTCATCTCTTTCCTACCTCTTCCTTTCCACCAAGACACACACTCCTCTACAACGAAGCAACAGCCCCATTTTCAACCCTCATAGACCATTCCTCTGCTTCCTTCGACCCTCAATTTCCAGGCGCCAAATCTCCGCTGCAATTGACGAGAATAATTTTGGGCTATCGTGGGTTTCTCCAAATGAGAATCCTAGTGACGATTTTGGTGGTTGGGCTGTTGTTGAGTATCCAGTTCCGCAGAAAAGGAAGAGAGCATTTCCCTCGTACGTGGCAGTTGGCATTGGTACTTCACTGGTTGTTCTGGCTGCCGTCATCGCTAGCTTTTCATTATCGACGAAAGGTTTTAAGATTCACTTTGGAGGCCCATTGCAAGTTTTGCATGGAATTTTGAGCCCTTTGAAAGTTCGAGGAGATCAAAACAAAACTGCAGAGGTTGAGACATCTAATGAGAATGATTTGATGTCGGAGGTGACGGAAGAAAATCTACCTGTTCCTATTACAGAAGCTGCTACGTCTGCCGTAGACAAGCCAGAGCGTGTTATAATTCCAGTGTCTGTCGATTCTACGCAAGAAGAAGCATTGTCACTCTTGAAGCTGCTGAAGATAATAGAAGATGACGTGGAGGCTCATGAATTGTGCACCAGAAGGGAATTTGCAAGATGGCTGATTAAATTAAATTATTTTCTGGAACGGAATCCAAAACGCAGGATTGCCCCATTAGTTACCCTCTCTGGGTCATTGGTTACTGCTTTTGATGACATCAGGGTTGAAGATCCAGATTTTGTGGCTATTCAAGCCTTGGCAGAAGCTGGTGTTATCCCCAGCAAATTATCTTCAAAAAGTTGGTTCAATTCTGGTGTACCAGAAGGTCAAGAGAACATGAAATTCTTTCCTGATGGATTCATTTCACGACAAGATTTAATGGATTGGAGAGCTCAGTTTGAGTATTATTTTTCCCCTGGTGCACTTGATCAGGTAAGATTCCAGATATCAACTAAAAAAGTGAGCTTTATGGATGTGAAGGAGATCAGTCCTCATGTGTCCCCAGCACTTTATGTGGACATGTTGGCAGGGGATAGGAGCTTACTCAGAAAAGTTTTTGGACAGAGCAAGCGGTTTCAGCCAAACAAGCCTTCAACAAAAGCGCAGGCAGCTGTGGCTTTGACAAGTGGCAGTATGAAGGAAGCAATTTCTTCTGAATTGTCAAGAATAGAATCTGAGAATTCTATTAGACAAGCCGAGGCAGAAGAGATTAAGTCTGAGTTGCTTAGAAGAGGAGACATACAGAAGTTTTGGGATCAGAAGTTTGATGAAGAAAAATTCCGTGGTTCTGATGTAGAGACGCATTATCTTGATGCATTAAAGACTTTGGAAGAAGAGAAAGTCAATTTAGATAGGACATATGCCGATTATTTAAAAGAAAAGGCAGCAATGGATTGTCAAAGGCAGCTTCTACTTAGCGTAAAGGAAGAGGTTGATGAAATGTCAGAAACACTTTCATCAGAGAGGGTTGCCTATCTAGATGAAAAGCACGTTGTGCTGCAGTTGCTCAAAGATCTGGAGTCCAAGCATGAAGAAATGCTTGATAAAAAATCTACACTGGAAGCTGAGAAAGAGGCTCTTCAGATTATGCGATCTTGGGTGGAGGATGAGGCAAGAAGAAGCCAAGCACGAGCAGCTGTTCTAGAGAAGGTGGGGCGAAGATGGAAAGGGACAACGAAGCTTGAATAG 2607 0.4384 MASSASASAVFLLFMARILGFTVAFLVLLWASAFSSSFLPSSLSHQHHLLYSLLHPLLMVIGFILISGEAILVHRWFPGSRGLKKCVHLWLQGLAMTCGFFGIWTKFQGKDGIVANFYSLHSWMGLLCISLFAAQWLIGFWNFWHRGEVRKVRNRILPWHVFLGLYTYGLAVATAETGLAEKLIFLQQAATTNLSKHSAESMVVNSLGLGLALLSVLVVFAALSPIKNQQLQQSLQTKFSFSDSSTIKKGLLVLVFFXYFRGGCPHPTASFRFAFRQTLVPKLLSTIEMCSATSSLSYLFLSTKTHTPLQRSNSPIFNPHRPFLCFLRPSISRRQISAAIDENNFGLSWVSPNENPSDDFGGWAVVEYPVPQKRKRAFPSYVAVGIGTSLVVLAAVIASFSLSTKGFKIHFGGPLQVLHGILSPLKVRGDQNKTAEVETSNENDLMSEVTEENLPVPITEAATSAVDKPERVIIPVSVDSTQEEALSLLKLLKIIEDDVEAHELCTRREFARWLIKLNYFLERNPKRRIAPLVTLSGSLVTAFDDIRVEDPDFVAIQALAEAGVIPSKLSSKSWFNSGVPEGQENMKFFPDGFISRQDLMDWRAQFEYYFSPGALDQVRFQISTKKVSFMDVKEISPHVSPALYVDMLAGDRSLLRKVFGQSKRFQPNKPSTKAQAAVALTSGSMKEAISSELSRIESENSIRQAEAEEIKSELLRRGDIQKFWDQKFDEEKFRGSDVETHYLDALKTLEEEKVNLDRTYADYLKEKAAMDCQRQLLLSVKEEVDEMSETLSSERVAYLDEKHVVLQLLKDLESKHEEMLDKKSTLEAEKEALQIMRSWVEDEARRSQARAAVLEKVGRRWKGTTKLE 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0668 868 Coils Coil 746 766 - -
Lele53g0668 868 Gene3D - 3 233 - -
Lele53g0668 868 CDD Cyt_b561_ACYB-1_like 59 187 - -
Lele53g0668 868 Pfam Eukaryotic cytochrome b561 54 185 IPR006593 -
Lele53g0668 868 PANTHER GPI-ANCHORED ADHESIN-LIKE PROTEIN 439 863 - -
Lele53g0668 868 Coils Coil 809 836 - -
Lele53g0668 868 FunFam Cytochrome b reductase 1 5 232 - -
Lele53g0668 868 ProSiteProfiles Cytochrome b561 domain profile. 15 223 IPR006593 -
Lele53g0668 868 SMART 561_7 54 179 IPR006593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0668 Lele-ChrLele53 16847128 16855268 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0668 4 225 Chloroplast and Mitochondria Gene Families AT1G26100 62.162 6.54e-77 248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0668 53 16847128 16855268 Lele55g0819 55 5587159 5591149 hybridization
Lele53g0668 53 16847128 16855268 Lele56g0762 56 5774557 5778470 hybridization