Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0650 ATGGAGTCTCCCTCCTTTTCATCCTCCTCCTGCGATTCCGGTACCATCGCAATCAGTGATCAGAATGTGGCGCGAGGTCGGAGAAGTGGCGAGGCCCATGAAGCTGTGACCTTTGAGCAATCGCGTCGGTGGCATGATGTTTTCTGGTCGGGCATATTTATAATTCACTTGCTTTTTCTGGCACTCATTTTGGGGGTTCTCGGCCTCGATAGGTTCCAGGAAAGGGATAGACTTCAGATTGGTATCTACACCAGACCACTTCACCGTCGTGAACATGGATTCACCGAGGATTACTGGCCGCTTTATGCTGTTGCTGGTGGAGTTGGAACTGTTCTCGGATTGAGTTGGCTGCTGCTGTTGGGTTATGGCGCAAACCAAATGATGAAGGTGTCTGTTCACATACTGACCACTTATCTTGCTGTGATCAGTGTTTTGTGTTTCTGGGCTGAACAACTTTTCTGGGGGTTTGTTTTTGCCACCGGAGCAACCCTGCAATTCTTGTACGTGGTATCGGTCATCGACAGTTTGGAAATTATTTTGATAGCAAGGAAACGCCTTTCTTCCACTCATGGTGGTGTTTCTTTAGTTTTACCCAATATCCAAATCCTCAGAATGTTGGGGAGAAAATCTAGAAAACCTAAGGAGGGTGGTCATATAAAGAGTTTAACCTGCAAATGTCACGCTTGTCTGGATGATGACTTTCTGGTTGCACTTCTTTTTTCCCCATCTAGACTTCCGTTTACCATGCTGATTCTGCAAAAAGCTATGAGGATGGTTTGCAATCTTCCTGAGGTTAAGAGAGTGGCATATGCATTTATGCTTGTGGTGCTTTTATGGATGGCCTTATGGTCTTTTGGTGCATCAGGCGTTGTGGCTTCAAGCATGTTTGATGTTGGATGCTGGTGGGTTCTTTTGGTGAGCCAGCAAGTTGTGCTCTTAATTCTATCTGTTCCTGTTGGTGTCAGTCTATTCTGGACAGGTGCTGTACTCTGTAATACTGTACATGTAATAGTGTCTGGGATGGTGTTTCTCAATCTTATCCATGGTGATAGAGATGCGACTTCAATACCCGCTAACTCCTTAATAAGATCTTTACAACATGCCTTGACAAAATCTTTCGGTAGCATTTGTTATGGCTCATTATTTACTGCTGCTATTAGGACACTTAGGTGGGAGATAAGGGGTTTCCGGTCGAAGATCGGCAACAATGAGTGTTTGCTTTGCTGTGTTGATTTCCTTTTCCATCTTGTGGAGACTCTGGTCCGATTCTTTAACAAGTATGCCTATGTTCAGATAGCTGTTAATGGCAAAAGCTTTAACCGTTCAGCAAGAGATGCCTGGGAGTTGCTCCAGTCAACCGGTGTTGAAGCACTTGTAGCATATGACTGTTCAGGTGCCGTCCTGCTAATGGGCGCTATCTGTGGTGGTTTGATAACCGGAACAAGCTCTGGCATTTGGGCGTGGTACAGATTCGATGATGGAGACAGAGTATTTATGATCGGAACCACATCTATGTTGATGGGGATGGTCTTGGTTGGAGTGGCCATGGTTGTGGTGGAAAGTGCTGTGACATCCATATATATCTGCTATGCGGAGGACCCCTTATTGATTCGGAGATGGGACACTGAATTTTTCAACCAAATGTCTGAGACACTTCACCAGAGACTTCAACATAGGAGTGCTCGAGTAAGGGAAGTTCTAACCCACTCACAACTTGAGTAA 1722 0.4535 MESPSFSSSSCDSGTIAISDQNVARGRRSGEAHEAVTFEQSRRWHDVFWSGIFIIHLLFLALILGVLGLDRFQERDRLQIGIYTRPLHRREHGFTEDYWPLYAVAGGVGTVLGLSWLLLLGYGANQMMKVSVHILTTYLAVISVLCFWAEQLFWGFVFATGATLQFLYVVSVIDSLEIILIARKRLSSTHGGVSLVLPNIQILRMLGRKSRKPKEGGHIKSLTCKCHACLDDDFLVALLFSPSRLPFTMLILQKAMRMVCNLPEVKRVAYAFMLVVLLWMALWSFGASGVVASSMFDVGCWWVLLVSQQVVLLILSVPVGVSLFWTGAVLCNTVHVIVSGMVFLNLIHGDRDATSIPANSLIRSLQHALTKSFGSICYGSLFTAAIRTLRWEIRGFRSKIGNNECLLCCVDFLFHLVETLVRFFNKYAYVQIAVNGKSFNRSARDAWELLQSTGVEALVAYDCSGAVLLMGAICGGLITGTSSGIWAWYRFDDGDRVFMIGTTSMLMGMVLVGVAMVVVESAVTSIYICYAEDPLLIRRWDTEFFNQMSETLHQRLQHRSARVREVLTHSQLE 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0650 573 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 33 562 IPR007603 GO:0022857|GO:0055085
Lele53g0650 573 Pfam Plasma-membrane choline transporter 234 534 IPR007603 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0650 Lele-ChrLele53 16661864 16665299 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0650 53 16661864 16665299 Lele55g0839 55 5774065 5777456 hybridization
Lele53g0650 53 16661864 16665299 Lele56g0780 56 5945290 5956251 hybridization