Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0649 ATGGCCGCTAACGCGGCCACCGTGCCGGAGGGTAAAATGGTTGAAAATGGTGGCTTAACATTTGACATGGACTATGCGCAATGGGTCAATGATCATCAACATCTGATAAATGACCTAAGAAGGGCTACTAATTCTCGAATGAAGGATAATGAACTACATATTGTTGTTGAGGGTGTAACAGCGCATTATGATGAATTATTTAGGTTAAAGAGCATAGGGACAAAGGCCGATGTACTTCACATGCTCTTCGGTATGTGGAAGAAGACGCCTGTAGAAAGATGTTTTCTTTGGCTAGGTGGATTCCGACCATCTGAACTTGTTAAGCTATTAAAGAACGAGCTTGAGGCATTAACAGAGCAGCAAGTGATGGAGTTGTATAATTTGCAGCGGTCTTCGATGATGGCCGAGGATGCTTTATCACATGGCATGGAGGCATTGCAAAACTCTCTCTCTAAGATACTTTCGTCAACCTTCGACGTCGGATCCACCAGTTCTACAAATATGGTTCAAGTCATGGAACTTGCTATGAACAAGCTTCACCACTTAGAGGGTTTCCTTCATGCACAAGCTCTGAGACTGTTGCAAAGAATGTTGAGGACGCCACAAGCAGCTCGAGCCTTCCTACTCATAAATGACCACATTTACCAATTACGACATGCTATACTAATTGCAATCGAATATCCTAGGAATCATTGTCATTCAGTGGTTGGAAATGGCACAAAGGCCGATGTATTTCACATTCTCTCCGGTACCTGGAAGACTCCTGTCGAAAGATGTTTTATGTGGTTAGGTGGGTTTCGATCATCTGAACTTCTTAAGATACTAAGCAACCAGCTTGATCCATTAACAGAACATCAATTAGTGGGATTGTATAATTTGCAGCAGTCTTCACTGCAGGCTGAGGATGCTTTATCACAAGGTATGGAAGCACTGCATAAATCTCTTTCGGAGACACTTTCCTCGACCTCCATCGGACCCGCCTGTTCCCGTAATATCGCCGCCACTTTAGGGAGTTTCCTACAGCAGGCTGATCTCTTGAGGCAACAAACACTGCAACAACTGCAAAAGATCTTGACCATACGACAAGTAGCACAAGCATTGCTTCTCATCAATGACTACATTTCTCGCCTGCGAAATGTCAAATGTAGTGGGACGACCTCTCCAATGATTGAGAGTAAACTGTAA 1185 0.4371 MAANAATVPEGKMVENGGLTFDMDYAQWVNDHQHLINDLRRATNSRMKDNELHIVVEGVTAHYDELFRLKSIGTKADVLHMLFGMWKKTPVERCFLWLGGFRPSELVKLLKNELEALTEQQVMELYNLQRSSMMAEDALSHGMEALQNSLSKILSSTFDVGSTSSTNMVQVMELAMNKLHHLEGFLHAQALRLLQRMLRTPQAARAFLLINDHIYQLRHAILIAIEYPRNHCHSVVGNGTKADVFHILSGTWKTPVERCFMWLGGFRSSELLKILSNQLDPLTEHQLVGLYNLQQSSLQAEDALSQGMEALHKSLSETLSSTSIGPACSRNIAATLGSFLQQADLLRQQTLQQLQKILTIRQVAQALLLINDYISRLRNVKCSGTTSPMIESKL 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0649 394 ProSiteProfiles DOG1 domain profile. 18 387 IPR025422 GO:0006351|GO:0043565
Lele53g0649 394 Pfam Seed dormancy control 240 276 IPR025422 GO:0006351|GO:0043565
Lele53g0649 394 Pfam Seed dormancy control 36 111 IPR025422 GO:0006351|GO:0043565
Lele53g0649 394 PANTHER TRANSCRIPTION FACTOR TGA9 18 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0649 Lele-ChrLele53 16657998 16660703 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0649 237 378 bZIP Transcription Factor Family AT1G68640 68.387 1.28e-54 185