Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0647 ATGTTTACTGTGAAGTCCAGCAATGTCGCTGTTGTTCCTATTAACTTGCAGTACGGGACATTGAGCTCGGTATCATTTCCCTCTCTCTCTCTTGTTGGTAGACAAAACATTGGGTCTTCAGAAATAGCTTCACCAGGGGCAGGGTGCCTTGATACAGGGCAGCAGCATATCATGTATCAGAAGGGAATCACGGCTGCCGGAGCCGCCATGACGGTGGGGAACGGGCATATGGAGAATTGGGGTGATTCCGGCATGGTAGATAATAGCCAACAGACTGATACTTCCACAGATATCGACCCCGATGATAAAACCCAATGTAACAGAGTTCAAGCTGGGAGAGCCGTGGTTGCTGATTCCATGGATCAACCTAAGTGCAAGCCTGAGGATCCTAAGACTCTTCGTAGGCTGGCTCAGAATCGAGAGGCAGCGAGAAAGAGTCGGTTGAGGAAAAAGGGAATGCTTGTTGCAAGTGGATTTCCTGGTGATCATGCTCATTCCATGGACGGAAACGGTGCGTTGGCATTCGATATGGACTATGCGCGATGGGTCGATGAGCATCAACAAGTGATAAATGACCTAAAAACGGCTGTTAATTCTCAAATGGGAGATAACGAACTGCATATCATTGTCGAGGGCGTTACGGCGCATTACAACGAGCTATTCAGGTTAAAGAGCATAGGGGCGAAGGCAGACGTATTTCACATGCTCTATGGTATGTGGAAGACGCCTGCAGAAAGATGTTTTATGTGGTTAGGTGGGTTTCGATCATCTGAACTTCTTAAGATACTGAGGAACCAGCTTGAGCCATTAACAGAACAGCAATTAGTGGAATTGTATAATTTGCAGCAGTCTTCATTGCAGGCTGAGGATGCTTTATCACAAGGCATGGAAGCATTGCATCAATCTCTATCAGAGACACTTTCCTCAACCTCCCTCGGACCCGCCGGTTCCGATAATGTCGCTGAATACATGGGTCAAATGGCGCTTGCTCTGAGCAAGCTCTCCACGTTGGAGAGTTTCCTACATCACGCTGATCTCTTGAGGCAACAGACACTGGAACAACTTCAAAAGATCTTGACCACGCGACAAATAGCACGTGCTTTCCTCGTGATAAATGACTACATTTCGCGACTACGAGCACTTAGTTCGTTATGGTTAGCTCGCCCTAGAGAGTAG 1176 0.4745 MFTVKSSNVAVVPINLQYGTLSSVSFPSLSLVGRQNIGSSEIASPGAGCLDTGQQHIMYQKGITAAGAAMTVGNGHMENWGDSGMVDNSQQTDTSTDIDPDDKTQCNRVQAGRAVVADSMDQPKCKPEDPKTLRRLAQNREAARKSRLRKKGMLVASGFPGDHAHSMDGNGALAFDMDYARWVDEHQQVINDLKTAVNSQMGDNELHIIVEGVTAHYNELFRLKSIGAKADVFHMLYGMWKTPAERCFMWLGGFRSSELLKILRNQLEPLTEQQLVELYNLQQSSLQAEDALSQGMEALHQSLSETLSSTSLGPAGSDNVAEYMGQMALALSKLSTLESFLHHADLLRQQTLEQLQKILTTRQIARAFLVINDYISRLRALSSLWLARPRE 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0647 391 Pfam Seed dormancy control 190 264 IPR025422 GO:0006351|GO:0043565
Lele53g0647 391 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 134 149 IPR004827 GO:0003700|GO:0006355
Lele53g0647 391 MobiDBLite consensus disorder prediction 82 104 - -
Lele53g0647 391 ProSiteProfiles DOG1 domain profile. 172 388 IPR025422 GO:0006351|GO:0043565
Lele53g0647 391 PANTHER TRANSCRIPTION FACTOR TGA9 75 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0647 Lele-ChrLele53 16627949 16630528 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0647 6 391 bZIP Transcription Factor Family AT1G68640 56.763 1.86e-135 393