Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele53g0641 | ATGAAGATATTCGTCAAGACTCTCAAGGGCACCAGCTTCGAAATCGAAGTCAAGCCTGAGGATACGGTTTCTGAAGTGAAGAAACATATAGAAACTGTCCAGGGTGCATCTGTATATCCTGCTGCACAGCAAATGCTTATTTATCAAGGGAAAGTTCTCAAAGATGGTACTACCTTGGAGGAAAGTACAGTAGTTGAAAACAGTTTTGTTGTAATCATGCTATCAAAGAGTAAGAGCTCATCGGGCGAGGGATCTACTACTGCATCTTCAGTTAAGGCCCCTCAGACTAGTTCAGCTCCTACGCCAGCTCCTTCGTCAACAGCACCTCAAGCACCTGCTCCAGCTGGGGCATTGCCTGTACCTGTTACTTCGCCTGCACCTTTGCCTTCACCAGCTCCAGCAGCTCCAGCTCCAGCTCCAGCTGCTGCCGTGTCAGGGTCTGATGTCTATGAGCAGGCAGCATCTAATCTTGTTGCTGGGAACAACTTGGAGGGAACAATTCAGCAAATTCTTGATATGGGTGGAGGTAGCTGGGATAGGGATACTGTTGTCCGAGCTCTTCGTGCTGCTTACAACAACCCTGAGAGAGCTGTTGAATACTTGTATACGGGTATCCCAGAGCAAGCTGAAGCTCCCCCTGTGGCTCCTGCGCCTGCAAGTGGTGCCCAAACTGGAAATGTTCCATCTGCAGCTCCACAAGCAGCACAACCTGCACCTGTTCCTTCTAGTGGGCCTAATGCTAATCCTTTAGATCTCTTTCCTCAGGGCCTCCCAAATGTTGGTGCTGGTGCAGCTGGTGCAGGCAATCTAGATTTTCTGCGCAACAGTCAACAGTTTCAAGCATTGCGAGCCATGGTGCAGGCTAATCCACAAATATTGCAGCCTATGCTTCAAGAGCTTGGGAAACAAAATCCTCATCTAATGAGATTGATTCAAGACCATCAAGCTGACTTCCTCCGCCTGATAAATGAACCTGTGGAAGGTGGTGAGGGGAATATATTGGGGCAGCTGGCCAATGCCATGCCGCAAACAATAGCTGTCACCCCTGAGGAGCGCCAAGCAATTGAACGTCTTGAAGCAATGGGATTCGATCGGGCGCTTGTTTTGGAGGTGTACTTTGCTTGTAACAAAAATGAAGAATTGGCTGCTAACTACCTCTTGGATCACATGCATGAGTTTGAGGAATGA | 1188 | 0.4865 | MKIFVKTLKGTSFEIEVKPEDTVSEVKKHIETVQGASVYPAAQQMLIYQGKVLKDGTTLEESTVVENSFVVIMLSKSKSSSGEGSTTASSVKAPQTSSAPTPAPSSTAPQAPAPAGALPVPVTSPAPLPSPAPAAPAPAPAAAVSGSDVYEQAASNLVAGNNLEGTIQQILDMGGGSWDRDTVVRALRAAYNNPERAVEYLYTGIPEQAEAPPVAPAPASGAQTGNVPSAAPQAAQPAPVPSSGPNANPLDLFPQGLPNVGAGAAGAGNLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPHLMRLIQDHQADFLRLINEPVEGGEGNILGQLANAMPQTIAVTPEERQAIERLEAMGFDRALVLEVYFACNKNEELAANYLLDHMHEFEE | 395 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele53g0641 | 395 | Gene3D | - | 261 | 326 | IPR036353 | GO:0003684|GO:0006289|GO:0043161 | |
| Lele53g0641 | 395 | Pfam | XPC-binding domain | 270 | 325 | IPR015360 | GO:0003684|GO:0006289|GO:0043161 | |
| Lele53g0641 | 395 | Gene3D | - | 156 | 206 | - | - | |
| Lele53g0641 | 395 | MobiDBLite | consensus disorder prediction | 76 | 104 | - | - | |
| Lele53g0641 | 395 | Gene3D | - | 343 | 390 | - | - | |
| Lele53g0641 | 395 | Gene3D | - | 1 | 80 | - | - | |
| Lele53g0641 | 395 | FunFam | UV excision repair protein RAD23 B | 261 | 326 | - | - | |
| Lele53g0641 | 395 | ProSiteProfiles | Ubiquitin-associated domain (UBA) profile. | 161 | 204 | IPR015940 | - | |
| Lele53g0641 | 395 | Pfam | Ubiquitin family | 3 | 76 | IPR000626 | GO:0005515 | |
| Lele53g0641 | 395 | PRINTS | DNA repair protein Rad23 signature | 296 | 318 | IPR004806 | GO:0006289 |
Showing 1 to 10 of 35 entries
Duplication type information
Functional genes information