Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0636 ATGACGAACCCTCTGAAGAACCTCACAAAACCTGGGAACCTGATGAAATTCCCCAAAACGGTAAAGCAAAAGCCTAATGTTCTTCCCTTTCGAAAGAAGCCTGTAATGTCCAGAAAACTACGGATTATTTATAACGATCTTGAAGCCACTGATTCATCTTCAAGCGAAGACGAAGAAGAAGAAGAAGAGGGGGAAAGCAGAAAGCTGAAGAGGATTAAACGGTGTGTTCGTGAGCTCACTCTGCCTCCTCTTTTTTCTGAGAAACCCAAACCTGTTGTTAAAACTGAGAGCTTAAATCGTAACTTTAATGGCAAAGGAGGTAAAGAATGTGAACCAGTTAAGCCTAAAGCACCAAGGAGACGTTCCTCTTCTCAATACAGAGGCGTTCGACTGAGAAATTCAGGGAAATGGGCGGCGGAGATTCGCCATCCTATCAAAGGTCGGAAATGGTTGGGTACTTTTGATACTCCAGAGGAAGCTTCTCAAGCTTATGAAGCCAAAAGAAGAGAGTTTGAAGCCATGTATTTCTCAAAGAAGAGCCCTCCTTCTGTTACTGTTTCTTCATATTCATCTTCTTCAACCGAAGATTCCAGTAGTGTTATTTCTCAGTCATCATCACCGCCCTCTGTTCTTGAAGTTTATAATAGTCGTATTTCAAGCAAAGAAATTGATCATTACGAGTCTGCATTTGCAGCTTTGCAAATGCCTGATTCGATTTTGTCATCGACATCACCACGTTGTTCTTCACCTTCACCTATGAATTCATCAGAGGAATACCACAAGACTTCAGGAAATTATAATGAAGCGAGTGATTTGGCGTCTGAACTTGATTTGAGTTTATCGGAAGTGCCAATTCCGGTTTGTTCATCAGAGCCTAATCACCTGTATGAGCTGGATTGTTTAATGGTGAATGATTTGGATCAGAATTTTGAAGATGATGATGATCTTTCTACGCTGCTGGGTATTGGAATTTGTGGGTTTAACAATGATGTTCCTTGTGAGCTTCCGGATTTTGATTTTGGCGATTTTGGTGAAGATGATGAGTTTGCTGGTTGGATTTAG 1062 0.4115 MTNPLKNLTKPGNLMKFPKTVKQKPNVLPFRKKPVMSRKLRIIYNDLEATDSSSSEDEEEEEEGESRKLKRIKRCVRELTLPPLFSEKPKPVVKTESLNRNFNGKGGKECEPVKPKAPRRRSSSQYRGVRLRNSGKWAAEIRHPIKGRKWLGTFDTPEEASQAYEAKRREFEAMYFSKKSPPSVTVSSYSSSSTEDSSSVISQSSSPPSVLEVYNSRISSKEIDHYESAFAALQMPDSILSSTSPRCSSPSPMNSSEEYHKTSGNYNEASDLASELDLSLSEVPIPVCSSEPNHLYELDCLMVNDLDQNFEDDDDLSTLLGIGICGFNNDVPCELPDFDFGDFGEDDEFAGWI 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0636 353 SMART rav1_2 125 183 IPR001471 GO:0003700|GO:0006355
Lele53g0636 353 CDD AP2 124 166 IPR001471 GO:0003700|GO:0006355
Lele53g0636 353 MobiDBLite consensus disorder prediction 178 207 - -
Lele53g0636 353 Gene3D AP2/ERF domain 124 175 IPR036955 GO:0003700|GO:0006355
Lele53g0636 353 Pfam AP2 domain 125 173 IPR001471 GO:0003700|GO:0006355
Lele53g0636 353 MobiDBLite consensus disorder prediction 1 20 - -
Lele53g0636 353 PRINTS Ethylene responsive element binding protein signature 147 163 IPR001471 GO:0003700|GO:0006355
Lele53g0636 353 PRINTS Ethylene responsive element binding protein signature 126 137 IPR001471 GO:0003700|GO:0006355
Lele53g0636 353 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 36 245 - -
Lele53g0636 353 SUPERFAMILY DNA-binding domain 124 171 IPR016177 GO:0003677
Lele53g0636 353 MobiDBLite consensus disorder prediction 180 207 - -
Lele53g0636 353 MobiDBLite consensus disorder prediction 241 264 - -
Lele53g0636 353 MobiDBLite consensus disorder prediction 46 69 - -
Lele53g0636 353 ProSiteProfiles AP2/ERF domain profile. 125 181 IPR001471 GO:0003700|GO:0006355
Lele53g0636 353 MobiDBLite consensus disorder prediction 86 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0636 Lele-ChrLele53 16519579 16520640 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0636 28 342 AP2-EREBP Transcription Factor Family AT1G68550 33.648 3.35e-32 121