Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0632 ATGACTTCTGCTAAGAACGCCGCCAGTGCCGTCGGCGGCAAGACCGCCAGAGCCTGCGACAGCTGCATGAGGAAGCGAGCTCGCTGGTACTGTGCCGCGGACGATGCTTTCCTCTGCCAGTCTTGTGACTCTCTGATTCACTCCGCCAACCCATTGGCTCGCCGGCATGAAAGGCTCCGATTGAAAACTTCGTCAGTTAAATACTCCTCCTCTGCCTCCTCCGATGCACTCGTTTTATCTGCCGTCGATCTCACTCTGGCTCCCTCGTGGCACCGAGGAATCACCAAGAAGCCTCGTACGCCTCGACATGGAAAGAACCAGTCCTCCTCTGCCCATCAAACGCCCAGAGGACGATACGAACCCACCAGAAACCCGTTCCATCTTGTGCCGGAAGTGGGTTCCGATGAACATTCCAATTCTCACGACGAAAACGAAGAGCAGCTTCTTTATCGGGTACCCATATTCGACCCGTTTGTTACAGAGCTATGTACTCCTCCGTCGTCCGCGACTTCAGCCGAAGCAGCAACAGCAGCTACGCCCGGTTCAAACCTGACGGACGACATTAAAGCCTCATCGGGAAACAAAAGCAATAATAATAATAATGGGGTGGACAATTTACACGGGTTTCTTCCATCTGAAATGGAACTCGCTCAGTTCGCCGCCGATGTAGAGAGTTTACTGGGCAGAGGATTAGAGAATGAGTGCATAGGCATGGAGGATTTAGGTCTTAGTGACAGTAAAGAGAAGGAGGAATCGAGGGAGTGTTGTGTGATGGGTAGTGAGAAAGTGAAGGTTGAAGATGATGAAGAGAGCCCATGTAAGATTGAAACTGCAGATGAGATTGGGATAGAGATGGGAATCAGAGAACCATTTGAATTGAACTTCGATTATGACGACTCTCCGGCAGCGCGCAAACAACCGGACGACAACGACATCGACGGCGACGAGGACGAGAAGAAGGTCGAGATGAGAAATAACGAAGGAGAACTCAAAGCAAATAGTAATCAGAGAAAGAGAAAGATACTATTGCACTTAGACTACGAAGCAGTTATTTCTGCTTGGGCATCGCAGAAATCTCCATGGACGACAGGCGGAAAACCAGAGTTAGACGCCAACGATTGTTGGCCGGAGTGCATGGGGACGTGTGGGATGGAGCTTCATCAACCCTACTATGGAGAAATGGGGGCATACGGCGGCGGGTGCCAGGCCGGAGGGATGGGAGACGGAGGGAGAGAAGCGAGAGTAACGAGGTACAGAGAGAAGAGGAGGACGAGGTTGTTCTCAAAGAAAATAAGGTATGAGGTTAGGAAATTGAATGCAGAGAAGAGACCAAGAATGAAAGGCAGGTTTGTGAAGAGGGCTTCTTTTGCAGTTGCAACACAACCACCACCATCTTTATCTCCATGCCCTTTGCTGAGCAGATAA 1425 0.506 MTSAKNAASAVGGKTARACDSCMRKRARWYCAADDAFLCQSCDSLIHSANPLARRHERLRLKTSSVKYSSSASSDALVLSAVDLTLAPSWHRGITKKPRTPRHGKNQSSSAHQTPRGRYEPTRNPFHLVPEVGSDEHSNSHDENEEQLLYRVPIFDPFVTELCTPPSSATSAEAATAATPGSNLTDDIKASSGNKSNNNNNGVDNLHGFLPSEMELAQFAADVESLLGRGLENECIGMEDLGLSDSKEKEESRECCVMGSEKVKVEDDEESPCKIETADEIGIEMGIREPFELNFDYDDSPAARKQPDDNDIDGDEDEKKVEMRNNEGELKANSNQRKRKILLHLDYEAVISAWASQKSPWTTGGKPELDANDCWPECMGTCGMELHQPYYGEMGAYGGGCQAGGMGDGGREARVTRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRASFAVATQPPPSLSPCPLLSR 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0632 474 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 8 455 - -
Lele53g0632 474 Pfam B-box zinc finger 16 58 IPR000315 GO:0008270
Lele53g0632 474 ProSiteProfiles CCT domain profile. 411 453 IPR010402 GO:0005515
Lele53g0632 474 SMART bboxneu5 14 61 IPR000315 GO:0008270
Lele53g0632 474 Pfam CCT motif 411 453 IPR010402 GO:0005515
Lele53g0632 474 ProSiteProfiles Zinc finger B-box type profile. 14 61 IPR000315 GO:0008270
Lele53g0632 474 MobiDBLite consensus disorder prediction 295 319 - -
Lele53g0632 474 MobiDBLite consensus disorder prediction 92 144 - -
Lele53g0632 474 MobiDBLite consensus disorder prediction 295 310 - -
Lele53g0632 474 CDD Bbox1_BBX-like 18 61 - -
Lele53g0632 474 MobiDBLite consensus disorder prediction 170 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0632 Lele-ChrLele53 16474532 16476090 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0632 5 453 C2C2-CO-like Transcription Factor Family AT1G25440 44.420 2.39e-106 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Lele53g0632 CCT 1.3e-17 CL0281