Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0622 ATGAGGTTTCTTTCTTCCTTCTCCATAGCTCACGCCCACCATCATTGCCCTGTTCCTGTTAGGTTTCAGGACTCTTCTTCTTCTTCGCTTACCCTTTTCCCTGCAATCACTTCTGCTTCTTGTTGTTGTTCTTCTTCTCGCAGACCTTGCTGGCCGCGAATGGATGCTGACTCTGCCTATCACCGCCATCGCCGGAAAGACAAGGCGGTTCTCGTAATGGGTGCCACCGGCTGTGGGAAGTCACGCCTGTCCATCGACCTCGCCACGCGTTGCGCCTGCTCGGAAATCATCAACGCAGATAAAATGCAACTTTACAGAGGACTTGACATCGCCACCAACAAGATTCCTTTGGGTGAACGGAACGGCGTCCTGCACCATCTCCTCGGAGACGTGGACCCTGCAAACGGAGAGTTATCGCCGTTGGATTTTCGTTCAGCCGCTGGGTCCATTATCTCGGATATCACCTCGAGGAGGAAGCTTCCCATCGTCGTCGGTGGGTCGAACTCGTTGATTCATGCTCTTGTTGTGGACCAGTTTGATCCGGCGTTGAATGTGTTCGATGAAGGATCGTCAGCGAGTTTGATCTCGTCCAAGTTAAGGTACAACTGTTGCTTCCTCTGGGTGGACGTATCGTTCACTGTGTTATCAGATTACTTGTTGAAACGAGTCGACGACATGCTCGACATGGGAATGGTGGACGAGTTGGCTCAGTTCTTCGACCCGGAAGCGAGCGACCTAGAAGATGACTCAGAACACCGGGTCGGGTTAAGGAAGGCGATAGGAGTACCCGAATTTGACCGGTATTTTAAGCGATATCCACAATCGGGTGGGCTGAGAAGAGAAGAGGATCGGCCGTGGAAGGCCGCGTACGAGGAAGCGGTCAGGGCGATAAAGGAAAACACTTGTCGGCTAGCGAAAAGGCAAATAGGGAAGATCTCTCGGCTTAAAGAAGCAGGGTGGGACCTACGGAGGCTGGACGCCACAGAGTCGTTCCGAGCGGCGATGACGCCGTCGAGATGCTCCGAAGACGGCGGCGAGAGATGGCCAGATATTTGGGAGAGGCAGGTGGCAGAACCAAGCGTGAAGATTGTGAAGAGGTTCTTGAAGGAGTAG 1113 0.5328 MRFLSSFSIAHAHHHCPVPVRFQDSSSSSLTLFPAITSASCCCSSSRRPCWPRMDADSAYHRHRRKDKAVLVMGATGCGKSRLSIDLATRCACSEIINADKMQLYRGLDIATNKIPLGERNGVLHHLLGDVDPANGELSPLDFRSAAGSIISDITSRRKLPIVVGGSNSLIHALVVDQFDPALNVFDEGSSASLISSKLRYNCCFLWVDVSFTVLSDYLLKRVDDMLDMGMVDELAQFFDPEASDLEDDSEHRVGLRKAIGVPEFDRYFKRYPQSGGLRREEDRPWKAAYEEAVRAIKENTCRLAKRQIGKISRLKEAGWDLRRLDATESFRAAMTPSRCSEDGGERWPDIWERQVAEPSVKIVKRFLKE 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0622 370 Pfam IPP transferase 198 309 - -
Lele53g0622 370 Pfam IPP transferase 103 178 - -
Lele53g0622 370 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 212 322 - -
Lele53g0622 370 Gene3D - 66 368 IPR027417 -
Lele53g0622 370 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 66 368 IPR039657 -
Lele53g0622 370 FunFam Adenylate isopentenyltransferase 212 322 - -
Lele53g0622 370 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 68 248 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0622 Lele-ChrLele53 16390371 16391483 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0622 200 369 C2H2 Transcription Factor Family AT2G27760 28.646 3.19e-13 68.9