Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0619 ATGGATCATCAACGGCTGAAGTTTCCACTGATTCAGTCATCAGAAAGCCTAGGGGAGAATTCTTCTTCTCTGCAAAATTCTGTAGATTTCCCAGAAATCAGAAAGAAAGCAGTTGGATTCAAAAGGAAGAGAAACAACAAGAGGATTGAAGAGAAACAGAAAGAAGCAATCCATGTCAGAGCAAAAAGATGTCAAGCTACTGATAGCCACAGTTTAGCCGAACGGGCGAGAAGAGAGAGAATCAATGAGAAGATGAGATGCTTGCAGGACCTGGTTCCAGGCTGCTACAAGGCAATGGGAATGGCAGTTATGTTAGATGTGATCATAAATTATGTTCTATCACTACAGCAACAGATTGAGCTCTCAGCAGCAAGCATATGTTTTGATTTCAACAGCTACCACATAGATACCATCCAAACCATGCAGAGAAGTACTAGCCCAGATGGAATCCAAGGGATGGAAGGAGAAGGCGATGGAGGCTTTGCTTATTGGAATCCTACATGGCCTCTTCAATAA 516 0.4264 MDHQRLKFPLIQSSESLGENSSSLQNSVDFPEIRKKAVGFKRKRNNKRIEEKQKEAIHVRAKRCQATDSHSLAERARRERINEKMRCLQDLVPGCYKAMGMAVMLDVIINYVLSLQQQIELSAASICFDFNSYHIDTIQTMQRSTSPDGIQGMEGEGDGGFAYWNPTWPLQ 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0619 171 Gene3D - 60 124 IPR036638 GO:0046983
Lele53g0619 171 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 65 115 IPR011598 GO:0046983
Lele53g0619 171 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 63 122 IPR036638 GO:0046983
Lele53g0619 171 Pfam Helix-loop-helix DNA-binding domain 69 99 IPR011598 GO:0046983
Lele53g0619 171 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 35 135 IPR024097 GO:0006355
Lele53g0619 171 SMART finulus 71 121 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0619 Lele-ChrLele53 16370344 16371936 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0619 51 142 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G25330 69.072 2.82e-42 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele53g0619 HLH 3.3e-05 No_clan