Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0614 ATGGAGGATCCGGTTGATCATTACCAAACCAAAAGAACGAACCCCACTAATTCCACCACGAGATTAAAGCTCTTCGGCTTCAATGTTCAAGAAGATATGGAAGACGAAGCAGTGGTGATTGAAGATGTATCAGATTCCACAGGCAAGCCTGCCACTCCATCTGGATCGCCGGATTACGGCGGAGGAGGAGGTGGGGTTGGTGATGGGGGTGGCGGTGGCGGTGGCGGTGCGGCGTTTCTTCCCTCTTCCGGTGACAGAAAATACGAGTGTCAGTATTGTTGCAGAGAGTTTGCGAATTCACAAGCGCTTGGCGGGCACCAGAACGCGCACAAGAAGGAGCGTCAACAACTAAAGCGAGCGCAGTTGCAAGCCACGCGCAACGCCGCCGTTTCGTTTGTTCGGAACCCCATAATCTCTGCCTTCGCCCCTCCGCCGCACCTCCTGGCTCCGAACGGGTCCGTCGTGCTACCGGCAGCTCCCGCCTCGTGGGTTTACATGCCACCACGTTCCGCGCCGTCTCCGTTCCATGTGTCGGTGTCTCATGGCTGTGTGTTTCCATCGTCGTCGCCAAATAACGCTGTGAATTATAGCGGTATTACAGGTGGGAGATCTGCGGCGGGTGCAGGGATGGTTCCATATGATGGCGGTGCAGGGGATTCATCATCCACATTGTCATCCCTCGGGTCTCCACATGGACTCTCTCGGGTCAACGGCCGGGTCGACGGGCCCTCCTTGAGTCGGTTCTCCAAGGTGGAATCAGGGTCCAATTTCGATGATCCACTAGGTTTAGACTTGCATCTCGGCCTTGCGCCGGCTGCGCCGTGA 825 0.5661 MEDPVDHYQTKRTNPTNSTTRLKLFGFNVQEDMEDEAVVIEDVSDSTGKPATPSGSPDYGGGGGGVGDGGGGGGGGAAFLPSSGDRKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVSFVRNPIISAFAPPPHLLAPNGSVVLPAAPASWVYMPPRSAPSPFHVSVSHGCVFPSSSPNNAVNYSGITGGRSAAGAGMVPYDGGAGDSSSTLSSLGSPHGLSRVNGRVDGPSLSRFSKVESGSNFDDPLGLDLHLGLAPAAP 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0614 274 MobiDBLite consensus disorder prediction 217 243 - -
Lele53g0614 274 MobiDBLite consensus disorder prediction 42 68 - -
Lele53g0614 274 FunFam Zinc finger protein GIS3 73 138 - -
Lele53g0614 274 SUPERFAMILY beta-beta-alpha zinc fingers 84 115 IPR036236 -
Lele53g0614 274 ProSitePatterns Zinc finger C2H2 type domain signature. 90 110 IPR013087 -
Lele53g0614 274 ProSiteProfiles Zinc finger C2H2 type domain profile. 88 115 IPR013087 -
Lele53g0614 274 PANTHER ZINC FINGER PROTEIN 5 11 273 IPR044299 GO:0010090
Lele53g0614 274 Gene3D Classic Zinc Finger 80 135 - -
Lele53g0614 274 MobiDBLite consensus disorder prediction 218 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0614 Lele-ChrLele53 16297298 16298122 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0614 17 272 C2H2 Transcription Factor Family AT1G68360 48.679 9.09e-56 178