Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0613 ATGAGAGCAAAAACCAAAACTTTCTTGGACCTTGGCGTCGTAGTTGTACAGTTGCATATCCCCTTCTTCAGCCTTGTTCACAGCGGACGGTCTTCCCTTTCTGACTCTGTGAAGAAGCGGTTGACGGCCGGAATGGGGGCGGGTTCCAAGATCGATGGACTTTCTACCCCATCAAATCGACGAGACCCTTATGAGGTATTGTCTGTGTCAAGGGACGCAAATGACCAGGAAATAAAAACGGCTTACAGAAAGCTCGCTCTCAAGTATCACCCTGACAAGAATGCTAACAATCCTGAAGCATCAGAATTATTTAAAGAGGTTTCATATTCTTACAACATCTTATCTGATCCAGAGAAGAGAAGGCAGTATGACAGTGCAGGATTTGAGGCACTTGATGCTGATAACTTGGACATGGAAATCGATTTGTCAAATCTTGGAACTGTTAACACAATGTTTGCAGCTTTATTCAGCAAGCTGGGTGTCCCTATCAAGACTACTATCTCAGCAAATGTTCTTGAAGAAGCCCTGAATGGCACAGTTACAGTCAGACCCCTTCCTATTGGAACTTCAGTTAGTGGAAAGGTAGAAAAGCAATGTGCTCATTTTTTTGGTGTGACGATAAATGAGCAGCAAGCTGAGGCAGGGATTGTAGTAAGAGTTACTTCAACTGCACAAAGCAAATTCAAACTGCTCTACTTTGAACATGATGCAAATGGTGGTTATGGTTTGGCGTTACAGGAAGATAGTGAGAAGACTGGCAAAGTGACATCTGCTGGCATGTATTTCTTACATTTTCAAGTATACAGAATGGATTCAACTGTGAATGCGTTAGCAATGGCGAAGGATCCTGAAGCTGCTTTCTTCAAAAGGTTGGAAGGTCTTCAACCTTGTGAAGTCTCAGAATTAAAGCCTGGCACTCATATATTTGCCGTTTATGGAGATAACTTCTTTAAGACTGCTTCCTATACAATTGAGGCTCTTTGTGCAAAATCTTTTGAGGATACCTCCGAAAAGCTTAAGGACATTGAAGGTCAAATTCTTAGAAAGAGGAACGATTTGCGCCAATTTGAATCAGAATACAGAAAGGCATTGGCACGCTATCAAGAGGTGACTGAAAGATATGCTCAAGAAAAACAATCGGTGGATGAACTTCTGCAACAGAGAGACACTATCCATTCTTCCTTCACCACTGCTAGGTCTGTCTCTGTTAGTGGGAACAGTAGTAATTTGAGTAACGGAAGTAGTAGTAAAATCCCGGGCGAGGATTCCAACAAGGTAGAGAGCCCTGTGGAAGATGGTGGAAGCTCAGATGGCAAGGATAAATCAGGCAAAAAGAAATGGTTCAACCTCAATCTTAAGGGTTCTGATAAGAAAAATTAA 1380 0.4225 MRAKTKTFLDLGVVVVQLHIPFFSLVHSGRSSLSDSVKKRLTAGMGAGSKIDGLSTPSNRRDPYEVLSVSRDANDQEIKTAYRKLALKYHPDKNANNPEASELFKEVSYSYNILSDPEKRRQYDSAGFEALDADNLDMEIDLSNLGTVNTMFAALFSKLGVPIKTTISANVLEEALNGTVTVRPLPIGTSVSGKVEKQCAHFFGVTINEQQAEAGIVVRVTSTAQSKFKLLYFEHDANGGYGLALQEDSEKTGKVTSAGMYFLHFQVYRMDSTVNALAMAKDPEAAFFKRLEGLQPCEVSELKPGTHIFAVYGDNFFKTASYTIEALCAKSFEDTSEKLKDIEGQILRKRNDLRQFESEYRKALARYQEVTERYAQEKQSVDELLQQRDTIHSSFTTARSVSVSGNSSNLSNGSSSKIPGEDSNKVESPVEDGGSSDGKDKSGKKKWFNLNLKGSDKKN 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0613 459 CDD DnaJ 62 116 IPR001623 -
Lele53g0613 459 FunFam Chaperone protein dnaJ 16 47 144 - -
Lele53g0613 459 MobiDBLite consensus disorder prediction 424 459 - -
Lele53g0613 459 SMART dnaj_3 61 119 IPR001623 -
Lele53g0613 459 Gene3D DnaJ domain 48 143 IPR036869 -
Lele53g0613 459 SUPERFAMILY Chaperone J-domain 58 131 IPR036869 -
Lele53g0613 459 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 55 458 - -
Lele53g0613 459 Coils Coil 339 387 - -
Lele53g0613 459 Pfam DnaJ domain 62 124 IPR001623 -
Lele53g0613 459 PRINTS DnaJ domain signature 82 97 IPR001623 -
Lele53g0613 459 PRINTS DnaJ domain signature 64 82 IPR001623 -
Lele53g0613 459 PRINTS DnaJ domain signature 99 119 IPR001623 -
Lele53g0613 459 PRINTS DnaJ domain signature 119 138 IPR001623 -
Lele53g0613 459 ProSiteProfiles dnaJ domain profile. 62 127 IPR001623 -
Lele53g0613 459 MobiDBLite consensus disorder prediction 396 459 - -
Lele53g0613 459 MobiDBLite consensus disorder prediction 396 422 - -
Lele53g0613 459 ProSitePatterns Nt-dnaJ domain signature. 104 123 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0613 Lele-ChrLele53 16275340 16281390 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0613 55 135 C2H2 Transcription Factor Family AT1G74250 40.698 3.85e-12 66.6