Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0610 ATGAAAGTGGCCGGAAACATGTCGAAGCTTCTAGAAAGCGAGAAGATCTTGTATTCATCAAGCCCATACCCTTCAAACCAACCCGGATTCGAGAGGGGACAAATGGTGTTCTTCGATGGGATGAAGAAGTTTGAACTAGAAGGCTTACTTCGAGCTTCTGCAGAAATGTTAGGGAAAGGTGGATTCGGAACGGCGTATAAAGCTGTTCTTGACGACGGCAATGTCGTCGCCGTGAAGAGGCTTAAGGAAGCTCAGATTAATGGGAAGAAAGAATTCGAACAACACATGGAAGTTCTCGACAAAGGAACTGTTAGATCAGCAGGATCTGGGAATTTTGATCACTGTACCTATTATTACTTTACGGCTGTACACCGTGCTAGGTTGAATAAAAAATACCAGTACCACACTGCTGTAGAAAAAGTCAATCCAATAGTCTCTTTTTCTTCTGTTTCCTCGCCTCTGTATTTCCCAGTTGCCAAGCAGGAATTTCAACCTCCCTGAAATAGAATAGAATTCCTAGGGAACCGAGGACCCGGAAGAAGCCCACTAGACTGGACCACGAGGCTCAAGATAGCCTCCGGAGTGGGCCGAGGCCTGGCCTTCATACATGGCTCATGCAAAGCCCTTAGCCTCACCCACGCACCCAAATCGAACGGCTATAGTGCGCCAGAAGCAGTGGACGGTCGGAAGAACACGCAGAAGTCCGACGTGTACTCCTTTGGTGTTCTTCTGCTGGAGCTTCTCACGGGGAAGTGCCCCTCCGTGGGGGATGCTGGTGGGCCCGGAGGAGGTGGGGCCGTGGACTTACCAAGGTGGGTCCAGTCAGTGGTGAGAGAGGAATGGACCGCTGAGGTGTTCGATATTGAGCTCATGAGGTACAAGGACATTGAAGTAAGAGGAGATGGTGGGTTTGCTTCAGATTGCCCTGTCTTGTTGCGTGGCTTTGCCAGATCAACGGCCCAAGATGAGCCACGTGGTGACGATGATCGAGGACTTGCGTGGGGTTGA 1008 0.504 MKVAGNMSKLLESEKILYSSSPYPSNQPGFERGQMVFFDGMKKFELEGLLRASAEMLGKGGFGTAYKAVLDDGNVVAVKRLKEAQINGKKEFEQHMEVLDKGTVRSAGSGNFDHCTYYYFTAVHRARLNKKYQYHTAVEKVNPIVSFSSVSSPLYFPVAKQEFQPPXNRIEFLGNRGPGRSPLDWTTRLKIASGVGRGLAFIHGSCKALSLTHAPKSNGYSAPEAVDGRKNTQKSDVYSFGVLLLELLTGKCPSVGDAGGPGGGGAVDLPRWVQSVVREEWTAEVFDIELMRYKDIEVRGDGGFASDCPVLLRGFARSTAQDEPRGDDDRGLAWG 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0610 335 ProSitePatterns Protein kinases ATP-binding region signature. 57 79 IPR017441 GO:0005524
Lele53g0610 335 ProSiteProfiles Protein kinase domain profile. 51 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele53g0610 335 SUPERFAMILY Protein kinase-like (PK-like) 55 287 IPR011009 -
Lele53g0610 335 Pfam Protein tyrosine and serine/threonine kinase 220 253 IPR001245 GO:0004672|GO:0006468
Lele53g0610 335 Gene3D Transferase(Phosphotransferase) domain 1 207 325 - -
Lele53g0610 335 Gene3D Phosphorylase Kinase; domain 1 32 105 - -
Lele53g0610 335 PANTHER OS05G0588300 PROTEIN 31 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0610 Lele-ChrLele53 16241580 16244664 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0610 8 297 Receptor kinase-like Gene Family AT1G68400 54.079 2.31e-101 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele53g0610 PK_Tyr_Ser-Thr 3.8e-07 CL0016