Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0609 ATGGTTTCAGTTCAGGCGTTTTGCTTTCTCTTAGTTTCATTCCTTGTGGTGCAGCTTTTCTGGGCGGGAGACGCAAAGTGCCCACCTCCATTTAACTGTGGAAATCTGGGGAACAAAATTCAGTTCCCTTTCACCAGCTCAGATCATCGCTCAAACTGTGGCTTATTGGTCATTCATGGCTGTGATGATGAAGAACCAACTGCCCCAAAATCCATTAAGTACTCTGAAACATGGTACGATGTTCTTGAACTCGACCACGACCAGTTCACCATGACCATCAGAGACGATCATCTCCATGAACTTTTGCTGTTAAATAGCTGCAAGGTCTTCACCTATGCTCTTTCTCTCCCTTTCAGTACAAACAATGATTTTCTTTCTTATCATTTAGAAAATAATTTCACTATGTTCGTCTGCGACAACCCCCCAAGTCTGAAGCCTCCCACAGGATCATACTATAACTATCGTTTTCACAACTGTCCTGAAGAAATCTTCTATAGAACTTCACTTTCTTATCGTGAGGGTTCTGATGATTCTGTGGTCTCCAGATTTTTGAACTCATCATCATGTAAACCGGTTCAGCTTCCAATCGCGAAGAACACCGAGGTTGTTGTCGATAATCCTTTTGCTTTCCTGTCTGATAATATCACCATCAGTATACAGCCATCCCCTCAGTGTTATAACTGTCACTACTATCATGGAGGACAATGTCGACTTGACTCCAAGGGCAGGTTTTTTTGTGCTAAAGAGAAAACAAGAAAGGTCACACTTATAGTGGCAACAGTTTCAGCCACTGGAGCCGTGGCAATACTTTTGGTCTCGGGATTCTACTTGCGAAGACGCTTTTACAGCAAGCAAAACCCTACCCACATAATAATTGAGCAATTTCTTGAAGAACATGGACACCTTGCAGCCAAAAGGTATAGTTACTTGGAGGTGAAGAAAGCCACAAACTCATTCAACAACAAGTTGGGTCAAGGAGGATTTGGCAGAGTGTACAAAGGCAGGTTAAGTGATGGAACTCTTGTTGCAGTGAAGGTTCTTACTGAATTGAATGGTGATGGTGAAGAATTCATCAATGAAGTTTCCAGCATTAGTGTGACTTCTCATGTCAACATTGTTAGCTTATTGGGTTTCTGCTTGGAGGGTTCAAAAAGAGCTTTGATATATGAGTACATGTCAAATGGATCTATTGACAAGTACATACAAACAAAGAAAGATCCATCAAAGATCAATCTGCAGTTAACCTGCAAAGCTATACACAATATCGCGATTGGTGTTGCTCGTGGATTAGAGTACCTACACAGAGGTTGTAACACTAGAATTTTGCATTTGGATATAAAGCCTCACAATATATTGCTGGACGATGACTTCTGTCCTAAGATATCAGACTTTGGATTGGCAAAAATTTGCCCGAAAAAGGATAGCATAGTGTCATTGTTGGGCGCGAGAGGAACTGCAGGATACATAGCGCCTGAAGTGTTTTCTAGGAACTTTGGTGGGGTTTCTCACAAGTCTGATGTGTATAGTTATGGGATGATGATGTTAGAAATAGTTGGAGGAAGAAGGAAGAATATGAACATGGAAGTTGAAGGTTCAAGTGAAATATTCATGCCACATTGGATTCACCAGCGTCTAAGATCAAACCAAGAGCTCAAATTGGAGTGCATAAAGAATGAAAAGGATAGAGAAGTAATCAAGAAGATAGTGATAGTGAGCTTATGGTGCATACAGATTGAGCCTTCAAATCGGCCAGCGATGAAGAAGGTGGTGGATATGATGGAAGGAGATTTGGAGTCCTTGGAATTACCACCTTTGCCTATTCTTTCTTTGCTTCCTACATCTTCCTCTGGGATTTTTTCAGAGGGTCTCATCTCTGACAGATTCCATTCTATCTCACTTACGTCCATAAACCAAGATGTAGAAGCTCTCATGGCGTTCAAAGCAGCTTCTGATACTCACAACAAGCTCACATCTTGGAACTCCACCACCCACCCCTGTAACTGGGTCTTTGTCTCATGCCTCAAGAATCGAGTTTCGCGACTTGTTCTTGAAAATCTCGACCTCCATGGTTCTATCGAGCAGTTAACTTCTCTCACTCAGCTTCGAGTTCTGAGCCTGAAGCGAAACCGTTTCTCCGGCCCCATTCCCAGTCTGTCCGATTTCACAGCTCTGAAGCTTCTGTTTCTTTCTCATAATAACTTCTCCGGTGCGTTTCCGGTGTCGGTTACGTCACTTCTCCGCTTGTATCGCCTTGATCTGTCTCACAACAATTTTTCCGGCAACATTCCAACTTCCGTCAACAATCTGACTCCCCTTCTCTCCCTCCGTCGCAATGATAACCAGTTCTCCGGTTACATTCCCATTCTAAACCTCTCCAAACTCCGAGACTTCAATGTCTCCGGTAACCGCCTCTCCGGCGAAATCCCCAAATCACTCTCGGGTTTCCCGTTATCATCGTTCTCTCAAAACCCATCCTTATGCGGAGCTCCATTGGTGAAATGTAGGACACTCATGCCGTACCATTTAAACCCGGATCTATGGGACCCAATATTCCATCGCCATTAA 2565 0.4316 MVSVQAFCFLLVSFLVVQLFWAGDAKCPPPFNCGNLGNKIQFPFTSSDHRSNCGLLVIHGCDDEEPTAPKSIKYSETWYDVLELDHDQFTMTIRDDHLHELLLLNSCKVFTYALSLPFSTNNDFLSYHLENNFTMFVCDNPPSLKPPTGSYYNYRFHNCPEEIFYRTSLSYREGSDDSVVSRFLNSSSCKPVQLPIAKNTEVVVDNPFAFLSDNITISIQPSPQCYNCHYYHGGQCRLDSKGRFFCAKEKTRKVTLIVATVSATGAVAILLVSGFYLRRRFYSKQNPTHIIIEQFLEEHGHLAAKRYSYLEVKKATNSFNNKLGQGGFGRVYKGRLSDGTLVAVKVLTELNGDGEEFINEVSSISVTSHVNIVSLLGFCLEGSKRALIYEYMSNGSIDKYIQTKKDPSKINLQLTCKAIHNIAIGVARGLEYLHRGCNTRILHLDIKPHNILLDDDFCPKISDFGLAKICPKKDSIVSLLGARGTAGYIAPEVFSRNFGGVSHKSDVYSYGMMMLEIVGGRRKNMNMEVEGSSEIFMPHWIHQRLRSNQELKLECIKNEKDREVIKKIVIVSLWCIQIEPSNRPAMKKVVDMMEGDLESLELPPLPILSLLPTSSSGIFSEGLISDRFHSISLTSINQDVEALMAFKAASDTHNKLTSWNSTTHPCNWVFVSCLKNRVSRLVLENLDLHGSIEQLTSLTQLRVLSLKRNRFSGPIPSLSDFTALKLLFLSHNNFSGAFPVSVTSLLRLYRLDLSHNNFSGNIPTSVNNLTPLLSLRRNDNQFSGYIPILNLSKLRDFNVSGNRLSGEIPKSLSGFPLSSFSQNPSLCGAPLVKCRTLMPYHLNPDLWDPIFHRH 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0609 854 SMART serkin_6 317 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele53g0609 854 Gene3D Phosphorylase Kinase; domain 1 293 391 - -
Lele53g0609 854 ProSitePatterns Serine/Threonine protein kinases active-site signature. 441 453 IPR008271 GO:0004672|GO:0006468
Lele53g0609 854 FunFam PR5-like receptor kinase 392 604 - -
Lele53g0609 854 ProSiteProfiles Protein kinase domain profile. 317 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele53g0609 854 SUPERFAMILY L domain-like 646 830 - -
Lele53g0609 854 Pfam Protein kinase domain 320 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele53g0609 854 FunFam Nuclear pore complex protein NUP107 636 788 - -
Lele53g0609 854 SUPERFAMILY Protein kinase-like (PK-like) 303 593 IPR011009 -
Lele53g0609 854 Pfam Leucine rich repeat N-terminal domain 637 673 IPR013210 -
Lele53g0609 854 PANTHER RUST RESISTANCE KINASE LR10-RELATED 291 611 IPR045874 GO:0004672
Lele53g0609 854 ProSitePatterns Protein kinases ATP-binding region signature. 323 345 IPR017441 GO:0005524
Lele53g0609 854 Gene3D Ribonuclease Inhibitor 632 696 IPR032675 -
Lele53g0609 854 Gene3D Ribonuclease Inhibitor 697 838 IPR032675 -
Lele53g0609 854 Gene3D Transferase(Phosphotransferase) domain 1 392 601 - -
Lele53g0609 854 FunFam serine/threonine-protein kinase PBS1-like 291 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0609 Lele-ChrLele53 16235159 16241379 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0609 27 623 Receptor kinase-like Gene Family AT1G66910 37.778 1.70e-120 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Lele53g0609 Pkinase 1.9e-44 CL0016