Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0604 ATGAAGTTGCGTGAACTTGAAGTAATGGCTCCCGATTCTGTGCTTCCTTTGCTTTGTCTCTGTTGTTTTCTGCTTCCTGTCTCAGTTGCGTGCCCAGAGCCCTTTCACTGTGGATATCTTGGGGATATTCGCTTCCCCTTCTTCGACAACACAACGAGCCCATCATGTGGTTTACTACCCATAGCAGGTTGTGATGATGATCCAATGAAACCCAGAACTGTCAAATTGGGAAAAGAATCAGAATGGTTACCAGTTGAGAAAATACTCTACAAGAACGACGACGAACAGCAAATCATCTCTCGCGACCCGAAGTTTGGAGAGAAATTGAGATCCAATCCTTGCAGTGTCTTTCTTGAGGAGCATCCTACGCTTTCTTCCTCTCTCTTAAACGGGATTTCTCATTTGAAATGCAAACACCGTCTCGACCAAGCATTCAAGTATTTCTGTAATGACTACTACATTTATGATCATCCCGACGATGATAATGAGTGGCCCGACCCTTCAAAAGAATGTTCTCTTATACAGCTTCCTTCCGAACGGCAATCTCCTATCTATATACAAGTACATGTACCTCAGTCTTGCATTGACTGTCATTATTCCAGAAAAGGGATATGCCTACCTGATGGAAAATGCAGCGTCCATGAGAACCAGAAAATGGATCCCAAGTCTATCACAATAGGTGTAGCTATTGGAAGTGTTGGCGTGATTATAATTGGTTTCATTGTTATTCTATTGTGGAAGAAACGAAGATACAAGTCCTTAGGCTCACAAAATCAGTCAAGAAGCATTGAATCTGATAATACTCACTCCAGAAGCAATCAATCTAATACAAACTCAAATGCAATCCTAGAAAGTAGAAATATCTACTTTGGGGTCCCTCTCTTCTCCTATGAGGAACTCCAAGAAGCAACAAACAAATTTGATCAATCAAGAGAACTGGGAAGTGGAGGCTTTGGAACTGTTTACTATGGAAAGCTTAAAGATGGACGAGAAGTTGCTGTGAAGCGCCTATTCGAGCGCAACTACAAACGTGTACAGCAATTCATAAATGAAGTTAATATCCTCACACGCTTGCGCCACAGAAACCTTGTGTCACTCTACGGCTGCACGTCGCGTGCCAGTCGGGAACTGCTGCTGGTCTATGAATACATTTCGAACGGAACTCTTGGTTGCCATCTCCATGGAAATCTAGCAAAACCTGGTTCACTGCCATGGCCCGTGAGGATGAGGATTGCCGTAGAGACAGCAAATGCATTGTCCTATCTCCATGCTTGTGGCATCATTCACCGCGATGTCAAATCCAGCAACCTTCTTCTTGACCACCATTTTTGCGTCAAGGTTGCTGACTTCGGTCTTTCAAGGTTGTTCCCCAAGTTTGTCTCTCATGTCTCCACAGCTCCAGCAGGAAGCCCGGGTTATTTGGACCCAGAATATCACCAATGCTACCAGCTTACTGAAAAGAGTGATGTTTATAGCTTCGGGGTCGTGCTCATTGAGATGATATCTTCAAAGCCAGCTATTGATGTTACAAGGCACAAGGATGAGATTAAATTGGCAAATCTGGCAGTTAACAAGATTCAAAGAGGAGCGTTCACTGAGCTGGTAGATCCTTCCCTTGGTTTTGAGTCAGATAACGAGGTTAAGAAGATGATAATCTCAGTGGCAACGTTGGCTTTTCAATGCCTACAGAGGGATAGGGAGCAAAGGCCTTCCATGGATGAAGTAATGGAGTTTCTGCAGAAAATTGAAAATGGGAATCATGACCTTAAGCATCTAGAGTTTCCCGGTACCGGCTTTTCAAACAAGGAGATTCATAGCGCTCTCCCTATCTCAGTACATAAGGATGGAGCTGGATCATTGAACAACTCGAAGCCACAACGCCCTCCCCATACAATATGA 1899 0.4387 MKLRELEVMAPDSVLPLLCLCCFLLPVSVACPEPFHCGYLGDIRFPFFDNTTSPSCGLLPIAGCDDDPMKPRTVKLGKESEWLPVEKILYKNDDEQQIISRDPKFGEKLRSNPCSVFLEEHPTLSSSLLNGISHLKCKHRLDQAFKYFCNDYYIYDHPDDDNEWPDPSKECSLIQLPSERQSPIYIQVHVPQSCIDCHYSRKGICLPDGKCSVHENQKMDPKSITIGVAIGSVGVIIIGFIVILLWKKRRYKSLGSQNQSRSIESDNTHSRSNQSNTNSNAILESRNIYFGVPLFSYEELQEATNKFDQSRELGSGGFGTVYYGKLKDGREVAVKRLFERNYKRVQQFINEVNILTRLRHRNLVSLYGCTSRASRELLLVYEYISNGTLGCHLHGNLAKPGSLPWPVRMRIAVETANALSYLHACGIIHRDVKSSNLLLDHHFCVKVADFGLSRLFPKFVSHVSTAPAGSPGYLDPEYHQCYQLTEKSDVYSFGVVLIEMISSKPAIDVTRHKDEIKLANLAVNKIQRGAFTELVDPSLGFESDNEVKKMIISVATLAFQCLQRDREQRPSMDEVMEFLQKIENGNHDLKHLEFPGTGFSNKEIHSALPISVHKDGAGSLNNSKPQRPPHTI 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0604 632 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 29 620 IPR044652 GO:0004672
Lele53g0604 632 FunFam Wall-associated receptor kinase-like 20 384 591 - -
Lele53g0604 632 Gene3D Transferase(Phosphotransferase) domain 1 384 591 - -
Lele53g0604 632 CDD STKc_IRAK 313 582 - -
Lele53g0604 632 MobiDBLite consensus disorder prediction 616 632 - -
Lele53g0604 632 Gene3D Phosphorylase Kinase; domain 1 279 383 - -
Lele53g0604 632 MobiDBLite consensus disorder prediction 257 277 - -
Lele53g0604 632 MobiDBLite consensus disorder prediction 613 632 - -
Lele53g0604 632 SMART serkin_6 307 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele53g0604 632 ProSiteProfiles Protein kinase domain profile. 307 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele53g0604 632 Pfam Protein kinase domain 308 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele53g0604 632 FunFam WAK1-OsWAK receptor-like cytoplasmic kinase (OsWAK-RLCK) 279 383 - -
Lele53g0604 632 SUPERFAMILY Protein kinase-like (PK-like) 288 585 IPR011009 -
Lele53g0604 632 ProSitePatterns Protein kinases ATP-binding region signature. 313 335 IPR017441 GO:0005524
Lele53g0604 632 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 31 - -
Lele53g0604 632 ProSitePatterns Serine/Threonine protein kinases active-site signature. 427 439 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0604 Lele-ChrLele53 16189311 16192306 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0604 35 584 Receptor kinase-like Gene Family AT1G25390 42.564 7.06e-149 443
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Lele53g0604 Pkinase 2.5e-48 CL0016