Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0594 ATGCTTCCTTTGGTCTCGTTGTTTCTTCTTCTTCTTCTTCTTCTCTGTAATCATCTTTCAACTGTGACTTCTCTGAATGCCGAAGGCTCTGTTCTTTTGGCTCTTAAGCAATCCATCACAGACCCAGAAGGGTCTATGAATAACTGGAATTCTTCTGATGCAAACCCTTGTTCGTGGAATGGGGTTACATGCAAGGAACAGAGTGTTATTTCTATCAGTATTCCAAAGAGGAACCTTTACGGCTCACTTCCTTCTTCTCTGGGATCTCTTTCTCAGCTTCGCCATGTGAATTTCAGGAACAATAAGCTCTTTGGGAAGTTACATCCAGAGCTATTCGTAGCACAAGGACTGCAAAGTTTAGTCCTTTATGGAAATTCCTTTTCTGGGCCTGTTCCACAAGAGATTGGGAAGCTCAGGTACCTTCAAACCTTAGATTTATCACAAAATTTCTTCAATGAGTCTTTACCTGCTACAATTGTACAATGCAAGAGACTCAGAACCCTTGTTCTGCATCACAACAATTTCACCGGTCCTCTTCCGGATCGATTTGGTACTGATTTTTTCTCTCTGGAAAAACTTGACCTTTCTTTTAATCACTTCAATGGCTCAATTCCTAGTGCTATGGGGAATCTATCTAGCTTACAAGGAACTGTAGACTTATCTCATAATAGTTTATCTGGCTCAATCCCACCCAGCCTTGGTAATTTGCCTGAGAAAATTTATATTGATCTTACTTTCAACAATTTGAGTGGTCCAATACCACAAAATGGTGCTTTGATGAACAGAGGACCAACAGCTTTTATAGGAAATTCTGGTCTCTGTGGACCTCCTTTGAAGAACCCTTGTTCTTCAGAAACTCCTGGTTCTAGCCCACCTTCCTCATTGCCATTTCTGCCAGATAACTACCCACCTGGGGATTCTGGTAATCCATATGGGAGAAATGAGAAAACCAAAGGGTTAAGTAAGGGTGCTATTGTAGGCATTGTTGTGGGTGATATAGTTGGAATTTGCCTCTTGGGTCTGTTGTTCTCTTACTGCTACTCAAGGGTTTGTGGGTTTAATCTGGATAATGATGATGAAGCTGGTTTTGAGAAGGGAGAGAAAGGGAGGAGGAAAGAGTGTTTTTGCTTCAGAAAGGATGAATCCGAGACCTTATCAGAGAATGTTGAGCAATATGATCTCGTCGCGTTAGATTCTCAAGTGGCATTTGATTTGGATGAGCTTCTTAAGGCTTCCGCTTTTGTTTTAGGAAAGAGTGGAATAGGCATTGTCTACAAGGTCGTGCTTGAAGATGGGCTTACCTTAGCCGTGAGAAGACTAGGCGAAGGCGGTTCTCAAAGGTTTAAAGAATTCCAAACAGAAGTGGAAGCAATAGGAAGATTAAGGCATCCTAACATTGTTACCCTTAGAGCTTATTACTGGTCTGTTGACGAGAAACTTCTCATCTATTATTATATACCCAATGGAAATCTTGCTACAGCAATTCATGGGAAGGCTGGAATAGTCGCATTCACACCACTTTCTTGGTCAGTGAGGCACAAAATCATGAAAGGAATTGCGAAAGGATTGGTCTACCTGCATGAGTTTAGCCCCAAAAAATATGTTCATGGAGATCTGAAACCAAGTAACATACTGCTTGGGAACAACATGGAACCGCACATTTCTGATTTTGGACTTGGAAGACTTGCGAATATTGCTGGAGGATCGCCAACCTTGCAATCCAATCGAGTTGCTGCTGAGAAACCCCATGAAAGGCAAAAGAGCTTTTCTGCATCAGAAGTCTCGACTAATGTTTTGGGAACTGGCTATCAGGCTCCAGAAGCATTGAAAGTGGTGAAGCCATCGCAGAAATGGGACGTTTATTCATATGGCGTGATTTTGATAGAGATGATCACAGGAAGGTTGCCCATTGTCCACGTGGGAAACTCGGAAATGGACCTTGTCCAATGGATTCAGTTCTGCATTGAGGATAAGAAGCCACTCTCAGATGTAATAGACCCATATCTTCCAGAAGACGCAGATAAGGAAGAGGAGATTATCGCAGTTTTGAAGATCGCAATGGCTTGTGTCCACAGCAGCCCCGAGAAGAGACCAACAATGAGGCATGTTCTCGATGCTTTGGATAGGTTGTCCGCTTCTTCTGATTGA 2148 0.425 MLPLVSLFLLLLLLLCNHLSTVTSLNAEGSVLLALKQSITDPEGSMNNWNSSDANPCSWNGVTCKEQSVISISIPKRNLYGSLPSSLGSLSQLRHVNFRNNKLFGKLHPELFVAQGLQSLVLYGNSFSGPVPQEIGKLRYLQTLDLSQNFFNESLPATIVQCKRLRTLVLHHNNFTGPLPDRFGTDFFSLEKLDLSFNHFNGSIPSAMGNLSSLQGTVDLSHNSLSGSIPPSLGNLPEKIYIDLTFNNLSGPIPQNGALMNRGPTAFIGNSGLCGPPLKNPCSSETPGSSPPSSLPFLPDNYPPGDSGNPYGRNEKTKGLSKGAIVGIVVGDIVGICLLGLLFSYCYSRVCGFNLDNDDEAGFEKGEKGRRKECFCFRKDESETLSENVEQYDLVALDSQVAFDLDELLKASAFVLGKSGIGIVYKVVLEDGLTLAVRRLGEGGSQRFKEFQTEVEAIGRLRHPNIVTLRAYYWSVDEKLLIYYYIPNGNLATAIHGKAGIVAFTPLSWSVRHKIMKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGNNMEPHISDFGLGRLANIAGGSPTLQSNRVAAEKPHERQKSFSASEVSTNVLGTGYQAPEALKVVKPSQKWDVYSYGVILIEMITGRLPIVHVGNSEMDLVQWIQFCIEDKKPLSDVIDPYLPEDADKEEEIIAVLKIAMACVHSSPEKRPTMRHVLDALDRLSASSD 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0594 715 Pfam Protein kinase domain 416 705 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele53g0594 715 FunFam Leucine-rich repeat protein kinase family protein 486 713 - -
Lele53g0594 715 ProSitePatterns Serine/Threonine protein kinases active-site signature. 534 546 IPR008271 GO:0004672|GO:0006468
Lele53g0594 715 PANTHER OS05G0588300 PROTEIN 135 710 - -
Lele53g0594 715 ProSiteProfiles Protein kinase domain profile. 410 710 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele53g0594 715 Pfam Leucine rich repeat N-terminal domain 26 64 IPR013210 -
Lele53g0594 715 SMART serkin_6 415 711 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele53g0594 715 FunFam Leucine-rich repeat receptor-like protein kinase 189 284 - -
Lele53g0594 715 CDD STKc_IRAK 416 710 - -
Lele53g0594 715 Gene3D Ribonuclease Inhibitor 21 78 IPR032675 -
Lele53g0594 715 MobiDBLite consensus disorder prediction 279 315 - -
Lele53g0594 715 Gene3D Ribonuclease Inhibitor 79 285 IPR032675 -
Lele53g0594 715 FunFam Leucine-rich repeat receptor-like protein kinase 393 485 - -
Lele53g0594 715 SUPERFAMILY Protein kinase-like (PK-like) 415 707 IPR011009 -
Lele53g0594 715 SUPERFAMILY L domain-like 27 279 - -
Lele53g0594 715 Gene3D Phosphorylase Kinase; domain 1 378 485 - -
Lele53g0594 715 Gene3D Transferase(Phosphotransferase) domain 1 486 715 - -
Lele53g0594 715 FunFam Leucine-rich repeat receptor-like protein kinase 25 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0594 Lele-ChrLele53 16098714 16101048 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0594 4 715 Receptor kinase-like Gene Family AT2G01210 67.406 0.0 986
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele53g0594 Pkinase 3.2e-35 CL0016