Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele53g0591 | ATGGAGGTTCCCTCCGCCGCTCCGGCCCCCGTCTCCGCCCCATCCTCTCATCTCAACTATCCCGACTCCGTCGAATCCTCTCCTCGCTCCCGGAACACCGATTCATGGGATGATTCTATGCCTCAGGCTGCCGCCGCGGCGGCTTCCGCCAAGCTTCGCTTCATGTGCAGCTACGGCGGCCACATCGTCCCTCGTCCCCATGATAAGGCCCTCTGTTACGTTGGCGGGGAAACCCGTATCGTTGTCGTTGAACGCCACACCTCCCTCGCTGACCTTTCCTCTCGTCTCTCTAATACCTTCCTCAACGGCCGTCCCTTCACTCTCAAATACTTGCTTCCCACTGAAGACCTCGATTCTCTAATTTCTGTAACAACCAATGAAGACCTCGATAACATGATCGATGAATACGATCGAATTTCTAATTCGTCACTGAAACCCTCTAGGATCCGCCTCTTCTTGTTCCCGGTGAAACCCGATTCAGCCCAATCGATACCTGTAATTAGTAGCTCGGCGAAGTCAGAGGATTGGTTTCTGGGTATGCTTAATAGAGGGTTTTCGGATTCTGGTTCCGTTAATTTGTTGATGGGTTTTGATGATGAGGTTGGCGGTGGCAATCTGGATGGGGGTTCGAAAGATGTCGAGGCTGTGGGGTCTGGATCTTTTGGAAATGGCAAGAGTGGGAAGCAGCAAGGGCAAGATGTTCACTCTGTGCCCGATTCACCTATGCTGGAAACCACATCTTCATTTGGGTCCACTTCTTCATCGCCGTCGGTGGCGAATTTGCCGCCAATTCGGGTTCATGTTGATGATGGTAGTGGTGGTGGAGCGAGGGCACAGGATCAGAAGGCGGTGGGGATTGAGGATCAGCTTGCTCAAATGGGTATTGGTGGTGGACAGAAGCAGGATGAGGGTTTTCTGATGTCTTCACCTTCTACTATGCCGGCATCCACCGTCCCTGCTGCCAGTGTGCCTATTGGCTCCTCGGTCCTTTCCGGTGAATACCAGAATCGTGTTGTATCTGATGATGAGAGATCAGACCATGGAGTCCTTGGGGGCTATAGAAAACCTTCAACAGCGCAGCAACAGACGGTGCCTCAGCCCCAGATTCTGCAATCGCAATTGCAGCAGAGGCAGACTGGAGGAGTTGATTTGCCTTCTCCTGATTCAGTTTCAAGTGACAGTAGTATGAAAAATGCAATATCACGTTCAAAACCTATGGTCTATCAAGACCCAGCTCAGCTCCAAATTCCCTCAGGAGCTACAAGGGTTCCTAGTAATCCGGTTGACCCGAAACTTACAGTGTCTGATTCTCATGGACGGATCCAAATGCAGCAACAAGTATTGGAACAGGGATATGTTTTGCAACAACAATTCGAACAACAGCAACAACAACAGCAGCAGCACCAATTTATACACGGAACGCAGCAACAAGTACAGGATGCGGGATATGTGTTGCAACAACAATTCGAACAGCAGCAGCAGCAACAACAACAACCTCCTCAACAGCAGCACCAATTTATACATGGAGCACAGCAACAAGTACAGGAAGCGGGATATGTATTGCAACCTCAATTCGAACAGCAACAGCAACAGCAACAGCAACAATTCATACATGGCACACATTTCATTCACCATGCCCCTTCCCAGGCCGTGCCACTCCCTGCATTTTATCCTGTATATCATTCCCAGCAGCAGCTTCATCCCCAGCATCATCATCAGCTTGAACAGCAGTATCAGGTTTACTATGTTCCCACTAGGCAGACCCAACATTACAACTTGTCTGCACAGCAATCTAATATTAGTGAACCTGCTACAACAATTCCTTCTAGCCGCGCCCAAACAACACCAAATCCTGCAGCTTACAACCCCATCAGAAATGCTCCTGTACCTAAATCTGAAATGACAGCAGGTGCATATAGAACAGCAATCTCAGTCACCCCTCAAGTGGTTCAAGTTGCTTCTGGTCAGCCTCAGCAGCAATTTGTTACCTATTCCCAGTATCAGCATCCATCTCAGGCTGTTGCTGCCAATTCTGCTGCCCCGGCTAGTTATTCTTATGAGTATGCCGATCCTGCTCATGCCCAGATATACTTCTCTCAGCCTCTGGCACCTACAATGACTTCACAGTACCAAACTATGACAGGTGCTGCTGCTGCAGAGCCTCCTTCAGACACCATGAAGCAGCAAATAAGAACATCACAGCCACAGTAA | 2211 | 0.4962 | MEVPSAAPAPVSAPSSHLNYPDSVESSPRSRNTDSWDDSMPQAAAAAASAKLRFMCSYGGHIVPRPHDKALCYVGGETRIVVVERHTSLADLSSRLSNTFLNGRPFTLKYLLPTEDLDSLISVTTNEDLDNMIDEYDRISNSSLKPSRIRLFLFPVKPDSAQSIPVISSSAKSEDWFLGMLNRGFSDSGSVNLLMGFDDEVGGGNLDGGSKDVEAVGSGSFGNGKSGKQQGQDVHSVPDSPMLETTSSFGSTSSSPSVANLPPIRVHVDDGSGGGARAQDQKAVGIEDQLAQMGIGGGQKQDEGFLMSSPSTMPASTVPAASVPIGSSVLSGEYQNRVVSDDERSDHGVLGGYRKPSTAQQQTVPQPQILQSQLQQRQTGGVDLPSPDSVSSDSSMKNAISRSKPMVYQDPAQLQIPSGATRVPSNPVDPKLTVSDSHGRIQMQQQVLEQGYVLQQQFEQQQQQQQQHQFIHGTQQQVQDAGYVLQQQFEQQQQQQQQPPQQQHQFIHGAQQQVQEAGYVLQPQFEQQQQQQQQQFIHGTHFIHHAPSQAVPLPAFYPVYHSQQQLHPQHHHQLEQQYQVYYVPTRQTQHYNLSAQQSNISEPATTIPSSRAQTTPNPAAYNPIRNAPVPKSEMTAGAYRTAISVTPQVVQVASGQPQQQFVTYSQYQHPSQAVAANSAAPASYSYEYADPAHAQIYFSQPLAPTMTSQYQTMTGAAAAEPPSDTMKQQIRTSQPQ | 736 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele53g0591 | 736 | SUPERFAMILY | CAD & PB1 domains | 67 | 163 | - | - | |
| Lele53g0591 | 736 | MobiDBLite | consensus disorder prediction | 16 | 39 | - | - | |
| Lele53g0591 | 736 | MobiDBLite | consensus disorder prediction | 205 | 281 | - | - | |
| Lele53g0591 | 736 | MobiDBLite | consensus disorder prediction | 714 | 736 | - | - | |
| Lele53g0591 | 736 | MobiDBLite | consensus disorder prediction | 605 | 628 | - | - | |
| Lele53g0591 | 736 | SMART | PB1_new | 66 | 156 | IPR000270 | GO:0005515 | |
| Lele53g0591 | 736 | MobiDBLite | consensus disorder prediction | 605 | 621 | - | - | |
| Lele53g0591 | 736 | PANTHER | OS05G0427100 PROTEIN-RELATED | 19 | 501 | - | - | |
| Lele53g0591 | 736 | CDD | PB1_UP2 | 55 | 154 | - | - | |
| Lele53g0591 | 736 | ProSiteProfiles | PB1 domain profile. | 51 | 156 | IPR000270 | GO:0005515 | |
| Lele53g0591 | 736 | MobiDBLite | consensus disorder prediction | 222 | 260 | - | - | |
| Lele53g0591 | 736 | MobiDBLite | consensus disorder prediction | 1 | 41 | - | - | |
| Lele53g0591 | 736 | MobiDBLite | consensus disorder prediction | 338 | 404 | - | - | |
| Lele53g0591 | 736 | Pfam | PB1 domain | 70 | 155 | IPR000270 | GO:0005515 | |
| Lele53g0591 | 736 | MobiDBLite | consensus disorder prediction | 355 | 402 | - | - | |
| Lele53g0591 | 736 | Gene3D | - | 70 | 155 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele53g0591 | Lele-ChrLele53 | 16076723 | 16079135 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele53g0591 | 12 | 198 | MAP Kinase Kinase Kinase | AT1G79570 | 34.225 | 1.80e-25 | 111 |