Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0582 ATGGGATTACAGAACAATCTCCAGGATGTCTCTTCCGATTCCATTCCCCTCCTCCTCCTCCTCCACCTTGCCGCCGGCCTCAATTACCTCCGTTCGTTCCTTTGCGCTTTCCTTCACTCTCTCGGCCTCTCAAGATTCCACTACTCTCACACGCCTGCTATTGTCGACGATGCCCTCCTCGCAGCCGTTGGATCCGGCCTCGCCCGCCTTGTGATTCTTTCCGACCAGCTCCACGCTACCAACTGTGATCTTGCTGACGATGACGACGACGATGACCGCGCGATTGCCGCCTCCTCCTCCATGTGTGTAGTGTGCCGGAGCGACTATAGGGAGGGCGACCAGGTAAGGAGGCTCACCTGCCGCCATGTTTTCCATAGACGCTGCTTCGATGCTTGGCTTCACCAGCTCAAGTTTAATTGTCCTCTCTGTCGATCGGCTCTCGAGTCCGACGAGCGCGTGGCCCTAGAAGAGCGGCGCGTTGGTACCGAAGTCTTATCCTGGTTCTCTGTTCGGTAA 516 0.5698 MGLQNNLQDVSSDSIPLLLLLHLAAGLNYLRSFLCAFLHSLGLSRFHYSHTPAIVDDALLAAVGSGLARLVILSDQLHATNCDLADDDDDDDRAIAASSSMCVVCRSDYREGDQVRRLTCRHVFHRRCFDAWLHQLKFNCPLCRSALESDERVALEERRVGTEVLSWFSVR 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0582 171 PANTHER RING ZINC FINGER PROTEIN-RELATED 77 166 - -
Lele53g0582 171 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 87 159 IPR013083 -
Lele53g0582 171 SUPERFAMILY RING/U-box 101 149 - -
Lele53g0582 171 SMART ring_2 102 143 IPR001841 -
Lele53g0582 171 ProSiteProfiles Zinc finger RING-type profile. 102 144 IPR001841 -
Lele53g0582 171 Pfam Ring finger domain 101 144 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0582 Lele-ChrLele53 15971897 15972412 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0582 1 170 C3H Transcription Factor Family AT1G15100 45.143 3.31e-41 134