Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0574 ATGGGGCGAGAAAGTCACAAAATAGCTTCAAGCTTGCTGAGAAGTAGAATCTGTGACCCCAAATTTATATTCAAGCATCTCCACGATCCGGACAGCAACTACAGTAAACTGAAATTCATGATATCAGGTTCAATTACTGAGGCATGCAATAATTCTATTCTGCTTCTTGGTCCCCGTGGCTCTGGGAAATCTGCGGTTCTGGAGCTTGTTGTTGGAGATTTATTGGTGGAGTATCCAGACATGATTTCAGTGATCAAGTTGAGTGGGCTTTTACATAGCGATGACAACTGTGCACTAAAGGAAGTAGCTAGGCAGTTATGCATGGAGCATCAATTGCAATTCTCAAAAGCGGCATCATTTGATGACAACTCTCAATTCATGGTAGCCATGCTAAAGGAGTGTGGGTTAGCCCATAAAACAATTGTATTTATTCTGGATGAGTTTGACCTGTTTGCCCAGGGTAAGCAGAGGTTGCTTTATAGCTTGCTAGACGCTATGCAATCAATAACATCGCAGGCTGTTGTAATTGGCATTAGTTGTCGGATGGATGCAGATCAGCTATTGGAGAAAAGAGTACGATCTCGTTTTTCACATAGGAAGTTATTGTTCCTTCCTCCTTCTATGGAAGACTCAAAGAAAATTTTGGAGCACGTGCTGTCTTTACCGGTGGATGCAAGCCTCCCACATGATTACGCTGTTGAGTTTAATAGAAAAGTTCAAAGTGGCTTTTTGACATACGAGAACTTTGAAATTGCATTCTCAAGTATTCTGAGGCAACCCAAATTGGAATGTTTAAAAAAGTATAAAAATGTACAAGATTCCTTCCAAACTTCTGATTACTATGCACGAAACGCATTTGAACATCTTCTAAGCCGTGGACTGATATGTTTCTCAGACAATAGAGGAAATAGTTCATCTGTCGAATTCCGCACTGTAAAGCTCTTAATCTCTTCTGCCGAACTACACCAAGGACTAAAAGCATATCATTCATGCCCTAATTTTTCAGTTGTAGCCGCATTTTCTGCTGAGGGTGCTTTAAGTGAAGTTTCCTTGCCAAAACTTCTTTTTTGTACTCTGCAACTGATAGATGGGAATGGGACTGAACAACGGGACATGATTGTAATGACCAGAAATATGGCTCATGTTTGGGGAACAACCATGAGGTTCATGTTTGGAGATAATAGAAATAAAGGGAAGGACGGAGCACTTTAA 1212 0.4068 MGRESHKIASSLLRSRICDPKFIFKHLHDPDSNYSKLKFMISGSITEACNNSILLLGPRGSGKSAVLELVVGDLLVEYPDMISVIKLSGLLHSDDNCALKEVARQLCMEHQLQFSKAASFDDNSQFMVAMLKECGLAHKTIVFILDEFDLFAQGKQRLLYSLLDAMQSITSQAVVIGISCRMDADQLLEKRVRSRFSHRKLLFLPPSMEDSKKILEHVLSLPVDASLPHDYAVEFNRKVQSGFLTYENFEIAFSSILRQPKLECLKKYKNVQDSFQTSDYYARNAFEHLLSRGLICFSDNRGNSSSVEFRTVKLLISSAELHQGLKAYHSCPNFSVVAAFSAEGALSEVSLPKLLFCTLQLIDGNGTEQRDMIVMTRNMAHVWGTTMRFMFGDNRNKGKDGAL 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0574 403 Pfam AAA ATPase domain 36 171 IPR041664 -
Lele53g0574 403 FunFam Origin of replication complex subunit 4 31 205 - -
Lele53g0574 403 PIRSF ORC4 3 261 IPR016527 GO:0000808|GO:0003677|GO:0005634|GO:0006260
Lele53g0574 403 PIRSF ORC4 246 340 IPR016527 GO:0000808|GO:0003677|GO:0005634|GO:0006260
Lele53g0574 403 Gene3D - 30 205 IPR027417 -
Lele53g0574 403 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 25 220 IPR027417 -
Lele53g0574 403 CDD AAA 51 199 - -
Lele53g0574 403 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 4 264 333 IPR016527 GO:0000808|GO:0003677|GO:0005634|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0574 Lele-ChrLele53 15855595 15860972 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0574 1 332 Core DNA Replication Machinery Family AT2G01120 52.771 5.23e-145 417