Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0563 ATGTTCTCAAATTTGTTTTCCGTATTCATGGTTCGCCGTCTATCTACCAGCGCGAAGCTTCCGAGCATATCAAAAATAAACTCTAGGTACAAAAACTTGGCTATCCGACAAGCCCAGAATGCTCTTACTGAATATCTCCATGGCACAAGCTGCTTGCCCTATGTTTATGCCGAGCATATTAGCAAGAACTCTCCTCTTTCGCTTGCTAGTCTCATAGCAAATGTGGATTTTTCAGCTGTCACTTTCTCAAAAAATCTCAAGAAATTCCTCAGGTACCATCCCATCAATGAGTTTGAATTTTTCTTTGAAAGCATTGGCATAGACTATAATGACGTTTCTGGGTTGTTGCCTCCGAACAAGTTTTTCTTTTCCGAAGATCGGACTATTCTCAATGCGGCTGGTGCGCTTTCGGAATTTGGATTTCCGTGGAATGAGTTAGGTAAGTTGTATGTTGAGAATAGTTCCATATTTAGGAGTAGTGCGGGAGAGCTCAAGTCTAAGCTATCAGAGTTTAAGAAATATGGTTTTCGTAATGTTCATTTAGTTGGTATATGTTTAGCTTTCCCTTATGTTTTGAGTGGGGGATGTGAAGTAGGTACTGAAAGTGAAGCATTGCTAAATTTTCTGAAGTTGGTATTTTTGGATTTTGAACTGGCATCTGTTGAGGAAAATGTGAATTCCTGGTACGAGGTATGTAAGAAAATTCGGGTATTTTATGATTTAAGTGGTAATAAGGAGAGGTTAGTGGAGCTCATCGGAGAAAATAAAAACATCTTTCTTGAACATGAGGAAAAGGCGTTGATTCAAAAGGTTGAGTATTTCTGTAGATTTGGTGTAAACAAGGAGGAGGTAGCTGTGTTACTTCTTCAGGGTCCAGAATTGTTGAGTCTTAATTTAGAGAAGCCAATGATTAACGTAATGACGATATTGGAATATTTCGGCTTGGAGACTGAAAACCTGAAGGATGTCAGTCAAAAGTATGATCATGTATTGGGGACGAACAAAATCGCTAATCTGCCTCAGGTAATGAGGGCTTTGGGCTTGCAAGAATGGTTCTTCAATAAAATCAGGGATGGAAATCATCAGTTGCTAATGAAATATATGGCAAGCTATCCTGATGAAGACCGAGCTGAAGAATACCAAAGTGGCTTGGAAATGGTTCACGTTTCGAGGACGCCGCATCATACCATGAGTAAACTAAACTTGTTGCATAGCTGGGGCTTTGGGGAAAATGCTTTAATCTTTGATCTCTTAGCACACTTGCATGGCACTAGTATTGAATTAAAGGAAAGATTTGATTGCCTTCTGTGTTCAGGGATTGAATACTCCAAGCTTTGTAAGATGGTAAGAATGACCCCTAAGATCCTAAACCAAAATGTTCAATCTTTAGAGCAGAAGGTGAGTTTCCTGTGTCAGGGAATGGGATGCTCCTTAGAGTATCTACATACATACCCAGGTTATTTGCTTTTTGGTTTAGAGAACCGCATTAAGCCTAGGTATAGATTTCATAAGTGGCTTGCAGAAAAGGGTCTATGTACCTTAGACTATTCCATTGCTAGCTTGGTTGCAACTAGTGAAAAGGCTTTTCTAGCTCGTGTTTACAAAATGCACCCAGCTGCTCCAAAACATTGGTTTGAGCAGTTCCGATTCTAA 1653 0.3975 MFSNLFSVFMVRRLSTSAKLPSISKINSRYKNLAIRQAQNALTEYLHGTSCLPYVYAEHISKNSPLSLASLIANVDFSAVTFSKNLKKFLRYHPINEFEFFFESIGIDYNDVSGLLPPNKFFFSEDRTILNAAGALSEFGFPWNELGKLYVENSSIFRSSAGELKSKLSEFKKYGFRNVHLVGICLAFPYVLSGGCEVGTESEALLNFLKLVFLDFELASVEENVNSWYEVCKKIRVFYDLSGNKERLVELIGENKNIFLEHEEKALIQKVEYFCRFGVNKEEVAVLLLQGPELLSLNLEKPMINVMTILEYFGLETENLKDVSQKYDHVLGTNKIANLPQVMRALGLQEWFFNKIRDGNHQLLMKYMASYPDEDRAEEYQSGLEMVHVSRTPHHTMSKLNLLHSWGFGENALIFDLLAHLHGTSIELKERFDCLLCSGIEYSKLCKMVRMTPKILNQNVQSLEQKVSFLCQGMGCSLEYLHTYPGYLLFGLENRIKPRYRFHKWLAEKGLCTLDYSIASLVATSEKAFLARVYKMHPAAPKHWFEQFRF 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0563 550 Gene3D Transcription termination factor 3, mitochondrial 202 355 IPR038538 -
Lele53g0563 550 Gene3D Transcription termination factor 3, mitochondrial 384 549 IPR038538 -
Lele53g0563 550 PANTHER CGI-12 PROTEIN-RELATED 163 535 IPR003690 GO:0003690|GO:0006355
Lele53g0563 550 SMART mt_12 446 477 IPR003690 GO:0003690|GO:0006355
Lele53g0563 550 SMART mt_12 147 177 IPR003690 GO:0003690|GO:0006355
Lele53g0563 550 SMART mt_12 285 316 IPR003690 GO:0003690|GO:0006355
Lele53g0563 550 SMART mt_12 249 280 IPR003690 GO:0003690|GO:0006355
Lele53g0563 550 SMART mt_12 478 512 IPR003690 GO:0003690|GO:0006355
Lele53g0563 550 Pfam mTERF 427 530 IPR003690 GO:0003690|GO:0006355
Lele53g0563 550 Pfam mTERF 136 344 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0563 Lele-ChrLele53 15633513 15635165 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele53g0563 mTERF 4.4e-13 No_clan