Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0481 ATGGAAAAAACCAAGCCTCGAGAATTCTACGATAACTATCGCAGGAAGATAATAAGGCGAATCAATTCGAATATATCTTCCATGGAAGAAGAAGAAGAAAAATATAGTAACAGAGCAGCTTCCACGTTGCACGGTTCTATATCGGTGATAGGGAGGCGGAGGATGATGGAGGACGCCGTGAAGATAATACCGGGATTCATGGGAAGCTACGATTTTTTCGCTGTTTACGACGGTCACGGTGGGGCCACGGTGGCGAATGCTTGCTGTAAAAGGATGCATTTGTTAGTGGCGGAGCAAGTAATAAAGGAGGCTGCTGAAGGAGATCATCAGAAGAGAGGATTGTTGGATTGGCGTGAAGCCATGTGCTCGTCCTTCATGAGGATGGACCGTGAAGTCGAAGATGAAGAGGACACCGTGGGCTCCACTGCGGTGGTCGTCGTCGTTAGCAGCAACCAGCTTGTTGTGGCCAACTGTGGAGACTCTCGAGCTGTACTCTGCCGTGGAGGTGTAGCCATCCCACTTTCAACAGATCATAAGCCAAATCGTCCAGATGAAAGAGAAAGGGTGGAAACAGCCGGAGGAACAGTGATAAGTTGGAACGGCGGCGATCGGATCTTAGGAATACTTGCCACTTCTAGATCCATAGGGGACCATTGCATGAAGCCATATGTAGTATCAGAGCCAGAGGTGAAGATATATGAAAGAACAGAGAAAGACGAGTTTATAGTAATAGCGAGCGACGGGTTATGGGATGTGATCTCCAACAAGTTGGCTTGTGAGGTGGTGATGAGGATTTTTAAGATGCGGTTCGTTAAGAGTGGGCCCGCAGAAGCTGCGGCGTTATTGGCAGAGTTGGCCATGGCTCATGGAAGTGGAGACAATATCAGCGTTATTGTAGTTCGCCTTAATTAA 912 0.4803 MEKTKPREFYDNYRRKIIRRINSNISSMEEEEEKYSNRAASTLHGSISVIGRRRMMEDAVKIIPGFMGSYDFFAVYDGHGGATVANACCKRMHLLVAEQVIKEAAEGDHQKRGLLDWREAMCSSFMRMDREVEDEEDTVGSTAVVVVVSSNQLVVANCGDSRAVLCRGGVAIPLSTDHKPNRPDERERVETAGGTVISWNGGDRILGILATSRSIGDHCMKPYVVSEPEVKIYERTEKDEFIVIASDGLWDVISNKLACEVVMRIFKMRFVKSGPAEAAALLAELAMAHGSGDNISVIVVRLN 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0481 303 SUPERFAMILY PP2C-like 39 303 IPR036457 -
Lele53g0481 303 Gene3D - 37 303 IPR036457 -
Lele53g0481 303 Pfam Protein phosphatase 2C 47 295 IPR001932 -
Lele53g0481 303 ProSitePatterns PPM-type phosphatase domain signature. 72 80 IPR000222 GO:0043169
Lele53g0481 303 PANTHER PROTEIN PHOSPHATASE 32 302 - -
Lele53g0481 303 SMART PP2C_4 33 300 IPR001932 -
Lele53g0481 303 Coils Coil 18 38 - -
Lele53g0481 303 CDD PP2Cc 44 302 IPR001932 -
Lele53g0481 303 ProSiteProfiles PPM-type phosphatase domain profile. 43 302 IPR001932 -
Lele53g0481 303 SMART PP2C_SIG_2 47 302 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0481 Lele-ChrLele53 14116868 14118827 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0481 43 302 PP2C-type Phosphatase Gene Family AT4G26080 45.608 8.09e-80 247