Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0472 ATGAAGGAGAAAATGAACATACCCAATGTTGTCGTCATGTTGGTCATGATTGCATCTCTTATGTTAGTGTCTGTAAGCTCAGCCTCACCCACGATTCACAATGTAGGAGGTGATTTTGGTTGGAATCTGCCATCCTACACAACATTCTATGATGATTGGGTAAAAAATACAACCTTTTCTGTTGGTGACATTCTGGCTTTCCATTACAAGCCGGGGTTGAACACGGTTGTGAAAGTTGACAAGGACGACTACGAAAATTGCACCTCTAGGAATACTTTAGCCACATATTTTCAAGGGGATGCCATTATTCAGTTAGACAAACCAGGCGACTATTACTTCTTTTGCAATGTTGGCAAGCATTGTGAGGCAGGCCAAAAGCTTCATGTCATTGTTCATTAA 399 0.411 MKEKMNIPNVVVMLVMIASLMLVSVSSASPTIHNVGGDFGWNLPSYTTFYDDWVKNTTFSVGDILAFHYKPGLNTVVKVDKDDYENCTSRNTLATYFQGDAIIQLDKPGDYYFFCNVGKHCEAGQKLHVIVH 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0472 132 Gene3D - 32 132 IPR008972 -
Lele53g0472 132 SUPERFAMILY Cupredoxins 31 131 IPR008972 -
Lele53g0472 132 ProSiteProfiles Phytocyanin domain profile. 31 132 IPR003245 GO:0009055
Lele53g0472 132 ProSitePatterns Type-1 copper (blue) proteins signature. 109 125 IPR028871 -
Lele53g0472 132 FunFam Cupredoxin superfamily protein 30 132 - -
Lele53g0472 132 Pfam Plastocyanin-like domain 41 125 IPR003245 GO:0009055
Lele53g0472 132 PANTHER BLUE COPPER PROTEIN 25 129 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0472 Lele-ChrLele53 13668420 13669755 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0472 15 131 Phytocyanin Superfamily AT2G25060 36.667 7.19e-23 86.7